RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ECI1P42126 302 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 TMEM211Q6ICI0 200 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 ABHD14AQ9BUJ0 271 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 SCNM1Q9BWG6 230 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 PLSCR4Q9NRQ2 329 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 ACACBO00763 2458 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 SHANK1Q9Y566 2161 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
LIMD1-202ENST00000440097 A0A087X0M5 115 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 A0A1B0GX30 115 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 CYB5BO43169 146 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 TRGC2P03986 189 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 SELEP16581 610 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 FABP6P51161 128 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 PIGPP57054 158 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 TAS2R60P59551 318 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 HERV-K104P61576 105 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 NKX6-1P78426 367 aaPredicted RBP12.01□□□□□ -0.49
LIMD1-202ENST00000440097 PSG7Q13046 419 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 FAM180AQ6UWF9 173 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 Q6ZPA2 131 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 KLF14Q8TD94 323 aaPredicted RBP12.01□□□□□ -0.49
LIMD1-202ENST00000440097 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 J3QW42 95 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 CDIPTO14735 213 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 HSD17B6O14756 317 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 FABP4P15090 132 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 MPV17P39210 176 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 PKIAP61925 76 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 DLK1P80370 383 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 OR8G1Q15617 311 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 GPR157Q5UAW9 335 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 STX12Q86Y82 276 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 WDR31Q8NA23 367 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 OR5AC1P0C628 307 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 CECR9P0C854 216 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 RAC2P15153 192 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 BEND4Q6ZU67 534 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 SEM1Q6ZVN7 128 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 BHLHA15Q7RTS1 189 aaPredicted RBP12□□□□□ -0.49
LIMD1-202ENST00000440097 C1orf162Q8NEQ5 155 aaPredicted RBP12□□□□□ -0.49
LIMD1-202ENST00000440097 OR52M1Q8NGK5 317 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 OR51I2Q9H344 312 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 PLK3Q9H4B4 646 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF71Q9NQZ8 489 aaPredicted RBP12□□□□□ -0.49
LIMD1-202ENST00000440097 KCNIP3Q9Y2W7 256 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 BTBD17A6NE02 478 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 OR5H1A6NKK0 313 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 J3QT63 122 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 TIMM8AO60220 97 aaPredicted RBP12□□□□□ -0.49
LIMD1-202ENST00000440097 IGKV3-15P01624 115 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 RND3P61587 244 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 IL24Q13007 206 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 Q8NFD4 153 aa12□□□□□ -0.49
LIMD1-202ENST00000440097 A0A087WWC5 75 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 TSTD3H0UI37 97 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 NXPH2O95156 264 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 SRP19P09132 144 aaKnown RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 TMEM187Q14656 261 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF429Q86V71 674 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 SCCPDHQ8NBX0 429 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 MBD3L2Q8NHZ7 208 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 ELOA3CA0A087WX78 387 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 DEGS1O15121 323 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 ATXN7O15265 892 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 TK1P04183 234 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 P2RY6Q15077 328 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 OR2G3Q8NGZ4 309 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 RTN4IP1Q8WWV3 396 aaPredicted RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 UNKLQ9H9P5 680 aaKnown RBP11.99□□□□□ -0.49
LIMD1-202ENST00000440097 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
LIMD1-202ENST00000440097 SCTP09683 121 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 AADACP22760 399 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 GCH1P30793 250 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF154Q13106 437 aa11.98□□□□□ -0.49
LIMD1-202ENST00000440097 SSX2Q16385 188 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms