RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC25A6P12236 298 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 NXPH1P58417 271 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 GNB2P62879 340 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 PRSS8Q16651 343 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 NMSQ5H8A3 153 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CRIP3Q6Q6R5 217 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 Q6ZRM9 215 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 OR5D13Q8NGL4 314 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CMTM2Q8TAZ6 248 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 YPEL4Q96NS1 127 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 TWSG1Q9GZX9 223 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 NAGKQ9UJ70 344 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 GOLT1BQ9Y3E0 138 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CACNA1EQ15878 2313 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 C2orf16Q68DN1 1984 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 DNAJC13O75165 2243 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 SYNGR3O43761 229 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 GZMHP20718 246 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CTSSP25774 331 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 FKBP2P26885 142 aaKnown RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 G6PCP35575 357 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CEACAM6P40199 344 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 PTGDSP41222 190 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 CCL7P80098 99 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 MSMO1Q15800 293 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 PDLIM3Q53GG5 364 aaPredicted RBP7.74□□□□□ -1.17
COPB1-202ENST00000439561 C10orf128Q5T292 105 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 SLC23A3Q6PIS1 610 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 SYT13Q7L8C5 426 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 TCF23Q7RTU1 214 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 TMPRSS7Q7RTY8 843 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 ZNF525Q8N782 197 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 OR10D3Q8NH80 312 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 SGMS2Q8NHU3 365 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 DECR2Q9NUI1 292 aa7.74□□□□□ -1.17
COPB1-202ENST00000439561 TRIOO75962 3097 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 PRUNE2Q8WUY3 3088 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 F6UZH7 168 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 NDUFB4O95168 129 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 GRPP07492 148 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 CA6P23280 308 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 CCKARP32238 428 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 MAS1LP35410 378 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 ZNF726P1Q15940 193 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TEX38Q6PEX7 206 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 CYP2G1PQ6ZSU1 146 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TMEM256Q8N2U0 113 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 SLC25A45Q8N413 288 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TXN2Q99757 166 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 SNHG12Q9BXW3 62 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 WNT5BQ9H1J7 359 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 GCM1Q9NP62 436 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TMEM9BQ9NQ34 198 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 LIN7CQ9NUP9 197 aaKnown RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 KCNIP1Q9NZI2 227 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 ATP23Q9Y6H3 246 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 hCG_38984A0A1B0GV85 526 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 NXPH2O95156 264 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 LIFP15018 202 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 PAX9P55771 341 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 RAC1P63000 192 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 SERF2P84101 59 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 HTD2P86397 168 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TMEM54Q969K7 222 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 CCDC74BQ96LY2 380 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 IMMP2LQ96T52 175 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 P2RX4Q99571 388 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 WDR61Q9GZS3 305 aaKnown RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 SERTAD4Q9NUC0 356 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 CHCHD2Q9Y6H1 151 aaPredicted RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 GALR2O43603 387 aaPredicted RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 HOXA6P31267 233 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 HIST3H3Q16695 136 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 RPP25LQ8N5L8 163 aaKnown RBP7.73□□□□□ -1.17
COPB1-202ENST00000439561 ACY3Q96HD9 319 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 OCIAD1Q9NX40 245 aa7.73□□□□□ -1.17
COPB1-202ENST00000439561 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 A0A1W2PR77 199 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 CBR3O75828 277 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 NGFP01138 241 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 NTF3P20783 257 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 OR3A1P47881 315 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 CDC34P49427 236 aaPredicted RBP7.72□□□□□ -1.17
COPB1-202ENST00000439561 RND2P52198 227 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 FGF12P61328 243 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 NUFIP2Q7Z417 695 aaKnown RBP7.72□□□□□ -1.17
COPB1-202ENST00000439561 CXorf67Q86X51 503 aaPredicted RBP7.72□□□□□ -1.17
COPB1-202ENST00000439561 FAM58AQ8N1B3 248 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 TMEM68Q96MH6 324 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 HSPB9Q9BQS6 159 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 C12orf49Q9H741 205 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 PIGBOS1A0A0B4J2F0 54 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
COPB1-202ENST00000439561 SYNGR4O95473 234 aa7.72□□□□□ -1.17
COPB1-202ENST00000439561 IGHV3-13P01766 116 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms