RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CREB3L1Q96BA8 519 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 ABHD14AQ9BUJ0 271 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 RNF212BA8MTL3 300 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 HSD17B6O14756 317 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 BET1O15155 118 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 HSPA12AO43301 675 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 GPR137BO60478 399 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 YPEL1O60688 119 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 RGS11O94810 467 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 GSTT2P0CG29 244 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 MNDAP41218 407 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 IGSF11Q5DX21 431 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 OR5R1Q8NH85 324 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 PIFOQ8TCI5 191 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 FAM216AQ8WUB2 273 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 ZFAND2BQ8WV99 257 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNRPB-202ENST00000438552 CMTM3Q96MX0 182 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 YPEL2Q96QA6 119 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 OCSTAMPQ9BR26 566 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 CABLES2Q9BTV7 478 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 ABCB10Q9NRK6 738 aa13.02□□□□□ -0.33
SNRPB-202ENST00000438552 A0A1W2PPI3 338 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 MEIS3P1A6NDR6 274 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 REG1BP48304 166 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 ACTG1P63261 375 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 AANATQ16613 207 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 Q6ZS49 121 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 OR2AK2Q8NG84 335 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 MDFIQ99750 246 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 DCUN1D5Q9BTE7 237 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 SLIRPQ9GZT3 109 aaKnown RBP13.01□□□□□ -0.33
SNRPB-202ENST00000438552 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
SNRPB-202ENST00000438552 FAM181BA6NEQ2 426 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 OOSP1A8MZH6 123 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 ST8SIA5O15466 376 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 RGS5O15539 181 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 FCER2P06734 321 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 ZBTB25P24278 435 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 CD24P25063 80 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 IL3RAP26951 378 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 CEACAM6P40199 344 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 SRSF7Q16629 238 aaKnown RBP eCLIP13□□□□□ -0.33
SNRPB-202ENST00000438552 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 FBLN7Q53RD9 439 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 C16orf87Q6PH81 154 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 LYG1Q8N1E2 194 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 IFI27L2Q9H2X8 130 aa13□□□□□ -0.33
SNRPB-202ENST00000438552 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
SNRPB-202ENST00000438552 CTDSP2O14595 271 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 TIMM23O14925 209 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 RAB7AP51149 207 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 DYNLT3P51808 116 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 ARHGDIBP52566 201 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 ZNF137PP52743 207 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 ZNF816Q0VGE8 651 aaPredicted RBP12.99□□□□□ -0.33
SNRPB-202ENST00000438552 LY6G6FQ5SQ64 297 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 SNX29P2Q8IUI4 249 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 ODF3L1Q8IXM7 274 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 OR56B4Q8NH76 319 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 RTN4IP1Q8WWV3 396 aaPredicted RBP12.99□□□□□ -0.33
SNRPB-202ENST00000438552 ST6GALNAC6Q969X2 333 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 C6orf62Q9GZU0 229 aaPredicted RBP12.99□□□□□ -0.33
SNRPB-202ENST00000438552 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 EXTL2Q9UBQ6 330 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 TCF19Q9Y242 345 aa12.99□□□□□ -0.33
SNRPB-202ENST00000438552 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 CHST1O43916 411 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 HLA-DQB1P01920 261 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-202ENST00000438552 OR3A3P47888 321 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 CCBE1Q6UXH8 406 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-202ENST00000438552 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 OR8H3Q8N146 312 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 BEST4Q8NFU0 473 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 MCFD2Q8NI22 146 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 CFHR4Q92496 578 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 SNAPC3Q92966 411 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 C11orf54Q9H0W9 315 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-202ENST00000438552 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 PTTG2Q9NZH5 202 aa12.98□□□□□ -0.33
SNRPB-202ENST00000438552 IGHV1-3A0A0C4DH29 117 aa12.97□□□□□ -0.33
SNRPB-202ENST00000438552 A6NDX4 124 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms