RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 LPAR2Q9HBW0 351 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 DLL3Q9NYJ7 618 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 LRRK1Q38SD2 2015 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 FAM157AC9JC47 383 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 MFNGO00587 321 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 EIF3GO75821 320 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPRF-204ENST00000412568 MBP02144 154 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 GYPAP02724 150 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 OR5G3P0C626 314 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF90Q03938 601 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 GGNQ86UU5 652 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 ZCCHC24Q8N2G6 241 aaKnown RBP9.59□□□□□ -0.87
PTPRF-204ENST00000412568 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
PTPRF-204ENST00000412568 TLN1Q9Y490 2541 aaKnown RBP9.59□□□□□ -0.87
PTPRF-204ENST00000412568 COL4A3Q01955 1670 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 hCG_38984A0A1B0GV85 526 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF154Q13106 437 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 IL13RA2Q14627 380 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 RTN4RL2Q86UN3 420 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 C15orf54Q8N8G6 183 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 OR1L1Q8NH94 360 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 FAM103A1Q9BTL3 118 aaKnown RBP9.59□□□□□ -0.87
PTPRF-204ENST00000412568 PRDM14Q9GZV8 571 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 OR51I2Q9H344 312 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 RNF122Q9H9V4 155 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 RNF7Q9UBF6 113 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 LPAR3Q9UBY5 353 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 PLXNB3Q9ULL4 1909 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 IGLV3-32A0A0A0MS00 114 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 VDAC1P21796 283 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 RPL29P47914 159 aaKnown RBP9.58□□□□□ -0.88
PTPRF-204ENST00000412568 NHLH2Q02577 135 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 ZNF345Q14585 488 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 NHLRC3Q5JS37 347 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 Q6ZT83 130 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 SPRR3Q9UBC9 169 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 FREM1Q5H8C1 2179 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 DVL1O14640 695 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 CLDN14O95500 239 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 CECR9P0C854 216 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 FGF7P21781 194 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 IGHV1-2P23083 117 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 MRPS11P82912 194 aaKnown RBP9.58□□□□□ -0.88
PTPRF-204ENST00000412568 PUSL1Q8N0Z8 303 aaKnown RBP9.58□□□□□ -0.88
PTPRF-204ENST00000412568 STPG2Q8N412 459 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 SLC25A28Q96A46 364 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 G3V3Q6 166 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 FGF8P55075 233 aaPredicted RBP9.58□□□□□ -0.88
PTPRF-204ENST00000412568 FOXF2Q12947 444 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 OVCH2Q7RTZ1 564 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 OR1A1Q9P1Q5 309 aa9.58□□□□□ -0.88
PTPRF-204ENST00000412568 H0YL77 283 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 OR7C2O60412 319 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 ZNRF1Q8ND25 227 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 TAAR6Q96RI8 345 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 PARD6AQ9NPB6 346 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 CYB5R3P00387 301 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 SLC25A6P12236 298 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 MDH2P40926 338 aaKnown RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 GLIPR1P48060 266 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 ASPHD2Q6ICH7 369 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 PAQR4Q8N4S7 273 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 NTNG2Q96CW9 530 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 SAT2Q96F10 170 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 PRUNE2Q8WUY3 3088 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 hADV38S2A0JD32 116 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 CLDN34H7C241 214 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 C1QL1O75973 258 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 DYNLT3P51808 116 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 PSG7Q13046 419 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 CXorf66Q5JRM2 361 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 LINC01560Q8TB33 94 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 FAM210BQ96KR6 192 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 MYOZ1Q9NP98 299 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 SLC2A8Q9NY64 477 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 OR6C3Q9NZP0 311 aa9.57□□□□□ -0.88
PTPRF-204ENST00000412568 RCC2Q9P258 522 aaKnown RBP9.57□□□□□ -0.88
PTPRF-204ENST00000412568 OOEPA6NGQ2 149 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 HBZP02008 142 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 CTSSP25774 331 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 HABP2Q14520 560 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-204ENST00000412568 OR8G5Q8NG78 346 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 LRFN3Q9BTN0 628 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 ZDHHC11Q9H8X9 412 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 A0A087X0M5 115 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 A0A1B0GX30 115 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 NCBP2LA6PVI3 153 aaKnown RBP9.56□□□□□ -0.88
PTPRF-204ENST00000412568 SYNGR2O43760 224 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 MELTFP08582 738 aa9.56□□□□□ -0.88
PTPRF-204ENST00000412568 RPL31P62899 125 aaKnown RBP9.56□□□□□ -0.88
PTPRF-204ENST00000412568 SLC38A11Q08AI6 406 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms