RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 FAM90A23PA8MXZ1 464 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 FAM90A15PP0C7V4 464 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 FAM90A13PP0C7W8 464 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 FAM90A14PP0C7W9 464 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 FAM90A24PP0C7X0 464 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM11P17152 192 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 CLDND2Q8NHS1 167 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 PILRAQ9UKJ1 303 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 ZFP30Q9Y2G7 519 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 C4orf51C9J302 202 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 ZNF735P0CB33 412 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 MRGPRDQ8TDS7 321 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 WDYHV1Q96HA8 205 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 Q96M66 194 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 TBX6O95947 436 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-202ENST00000409031 DNLZQ5SXM8 178 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 OR10S1Q8NGN2 331 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM170AQ8WVE7 144 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 NPVFQ9HCQ7 196 aa15.33■□□□□ 0.04
SMPD4-202ENST00000409031 OOEPA6NGQ2 149 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 EML2O95834 649 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 VEGFBP49765 207 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 SLC35B1P78383 322 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 DEFB108BQ8NET1 73 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 AAMDCQ9H7C9 122 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 KIAA0100Q14667 2235 aaKnown RBP15.32■□□□□ 0.04
SMPD4-202ENST00000409031 NPIPB7O75200 414 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 COL8A1P27658 744 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 DMWDQ09019 674 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 BLNKQ8WV28 456 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 SFRP2Q96HF1 295 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 FOXS1O43638 330 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 PGLYRP1O75594 196 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-202ENST00000409031 LEPROTL1O95214 131 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 IBA57Q5T440 356 aaKnown RBP15.32■□□□□ 0.04
SMPD4-202ENST00000409031 C14orf144Q96I85 54 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 RNF122Q9H9V4 155 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 ATP23Q9Y6H3 246 aa15.32■□□□□ 0.04
SMPD4-202ENST00000409031 J3QT63 122 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 NPY1RP25929 384 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 SRIP30626 198 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 VMA21Q3ZAQ7 101 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 STXBP6Q8NFX7 210 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 PXMP4Q9Y6I8 212 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 AESQ08117 197 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 WIPI1Q5MNZ9 446 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 LHX8Q68G74 356 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 ALKBH7Q9BT30 221 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 PEF1Q9UBV8 284 aaKnown RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 RALYQ9UKM9 306 aaKnown RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 FAM186AA6NE01 2351 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 Q1RN00 199 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 ZNF766Q5HY98 468 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 LYG1Q8N1E2 194 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 OR4F17Q8NGA8 305 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
SMPD4-202ENST00000409031 MST1P26927 711 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 MISP3Q96FF7 219 aa15.31■□□□□ 0.04
SMPD4-202ENST00000409031 KNTC1P50748 2209 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 IGHV3-43A0A0B4J1X8 118 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 A8MWL6 223 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 DLEU1O43261 78 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 SMIM10L1P0DMW3 83 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 IGHV3-43DP0DP04 118 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 FAM27BQ5VT28 67 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 SSX8Q7RTT4 187 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 SMIM10Q96HG1 83 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 EGLN1Q9GZT9 426 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 FOXD3Q9UJU5 478 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-202ENST00000409031 KLF13Q9Y2Y9 288 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-202ENST00000409031 TRBV24-1A0A075B6N3 115 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 PMS2P1A4D2B8 440 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 KLF3P57682 345 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-202ENST00000409031 NIT1Q86X76 327 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 MMD2Q8IY49 270 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 MTURNQ8N3F0 131 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 OR2H1Q9GZK4 316 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 SLC22A20A6NK97 555 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 SCTP09683 121 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 LINC00614P0C842 121 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 LSM10Q969L4 123 aaKnown RBP15.3■□□□□ 0.04
SMPD4-202ENST00000409031 LAMTOR2Q9Y2Q5 125 aa15.3■□□□□ 0.04
SMPD4-202ENST00000409031 GREM1O60565 184 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 AMY1AP04745 511 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 SRD5A2P31213 254 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 C9orf40Q8IXQ3 194 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 CYTL1Q9NRR1 136 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 CLDN16Q9Y5I7 305 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 CLEC3BP05452 202 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 FGF12P61328 243 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 GNB1P62873 340 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 ICAM4Q14773 271 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 OR10D3Q8NH80 312 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 MENTQ9BUN1 341 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 DECR2Q9NUI1 292 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 OR2T6Q8NHC8 308 aa15.29■□□□□ 0.04
SMPD4-202ENST00000409031 TMEM45BQ96B21 275 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms