RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 TNFRSF4P43489 277 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 GCSAMLQ5JQS6 135 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PDPNQ86YL7 162 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 FADS6Q8N9I5 356 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 C16orf52Q8NHV5 167 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 ST8SIA1Q92185 356 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 BOD1Q96IK1 185 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PRR13Q9NZ81 148 aa8.41□□□□□ -1.06
SMAD9-203ENST00000399275 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
SMAD9-203ENST00000399275 PRTGQ2VWP7 1150 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 A0A0G2JLM5 398 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE12JA6NER3 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE7O76087 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF205O95201 554 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 TIMP1P01033 207 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 IL3RAP26951 378 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 MPLP40238 635 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 GAGE4Q13068 117 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM176BQ3YBM2 270 aaPredicted RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 IBA57Q5T440 356 aaKnown RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 MRGPREQ86SM8 312 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 RCC1LQ96I51 464 aaKnown RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 POM121L2Q96KW2 1035 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 IL23AQ9NPF7 189 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 MRPS16Q9Y3D3 137 aaKnown RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 SYNGR2O43760 224 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 SLC36A1Q7Z2H8 476 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 C20orf196Q8IYI0 205 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 SOSTQ9BQB4 213 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
SMAD9-203ENST00000399275 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.06
SMAD9-203ENST00000399275 FRG2CA6NGY1 282 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 SERF2P84101 59 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 EDDM3AQ14507 147 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 RDH5Q92781 318 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF414Q96IQ9 312 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 MRGPRX3Q96LB0 322 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.07
SMAD9-203ENST00000399275 A0A087WWC5 75 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 CBLN1P23435 193 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 FCGR2BP31994 310 aaPredicted RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 ZP1P60852 638 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 SELENOTP62341 195 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 LRRC75BQ2VPJ9 315 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 PP6455Q8WZ26 134 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 WDYHV1Q96HA8 205 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 TXNDC17Q9BRA2 123 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 SPXQ9BT56 116 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 TBC1D29Q9UFV1 150 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 FAM181BA6NEQ2 426 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 KIR2DL1P43626 348 aaPredicted RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 KIR2DL2P43627 348 aaPredicted RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 OR8B12Q8NGG6 310 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 OR52M1Q8NGK5 317 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 Q8WTZ3 238 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF665Q9H7R5 613 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 J3QR06 171 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 PITX3O75364 302 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 NDUFC2O95298 119 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 EFNB1P98172 346 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 VSTM2AQ8TAG5 236 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 FOXC2Q99958 501 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 RNF186Q9NXI6 227 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 CISD1Q9NZ45 108 aaKnown RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 KIAA1217Q5T5P2 1943 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 C5orf49A4QMS7 147 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 SELLP14151 372 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 DIRC2Q96SL1 478 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 VSIG4Q9Y279 399 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 PTRH2Q9Y3E5 179 aaKnown RBP8.39□□□□□ -1.07
SMAD9-203ENST00000399275 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 ANKRD31Q8N7Z5 1873 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 TMEM155Q4W5P6 130 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 FNDC7Q5VTL7 733 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 WFDC8Q8IUA0 241 aa8.39□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF296Q8WUU4 475 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms