RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 HEATR1Q9H583 2144 aaKnown RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 DOCK7Q96N67 2140 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DUXBA0A1W2PPF3 345 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 J3QKU1 62 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 HTR1DP28221 377 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 EFNA4P52798 201 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 TMUB2Q71RG4 321 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 FAM219AQ8IW50 185 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 RELL2Q8NC24 303 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 NANPQ8TBE9 248 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 WDR89Q96FK6 387 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM68Q96MH6 324 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 RASL11BQ9BPW5 248 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 CHODLQ9H9P2 273 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 A0A1W2PN81 502 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 LEUTXA8MZ59 168 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 HBE1P02100 147 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 INHBBP09529 407 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 CHRNA7P36544 502 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 TAS2R30P59541 319 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DEFA5Q01523 94 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF672Q499Z4 452 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 OVCH2Q7RTZ1 564 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 NR2C2APQ86WQ0 139 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ABHD12Q8N2K0 398 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF645Q8N7E2 425 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DRAXINQ8NBI3 349 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 GTF3AQ92664 365 aaKnown RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 THYN1Q9P016 225 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 SRRM5B3KS81 715 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DVL1O14640 695 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 CDS2O95674 445 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 HTR2BP41595 481 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ADIPOQQ15848 244 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 TCTE3Q8IZS6 198 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 OR5M8Q8NGP6 311 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 LHX4Q969G2 390 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 CLEC7AQ9BXN2 247 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 CNTNAP3Q9BZ76 1288 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 PRNDQ9UKY0 176 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ATG2AQ2TAZ0 1938 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 SRSF10O75494 262 aaKnown RBP6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DSCR9P59020 149 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 HGFACQ04756 655 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 MITD1Q8WV92 249 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 RNF141Q8WVD5 230 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 SLC25A28Q96A46 364 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 ABHD14BQ96IU4 210 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 GCM1Q9NP62 436 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 SLC39A9Q9NUM3 307 aa6.99□□□□□ -1.29
PTPRD-204ENST00000397606 M0R036 132 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 YIF1AO95070 293 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 HPRT1P00492 218 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 CD74P04233 296 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM186Q96B77 213 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 PRORYQ9H606 182 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ELF5Q9UKW6 265 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-204ENST00000397606 GPR132Q9UNW8 380 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 FAM208BQ5VWN6 2430 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ANKRD34BA5PLL1 514 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 H3BP45 60 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ADAM10O14672 748 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 SSTR5P35346 364 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 REG1BP48304 166 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 GZMKP49863 264 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM50BP56557 158 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ZP1P60852 638 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 MMDQ15546 238 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 TNXAQ16473 311 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 FAM89BQ8N5H3 189 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 SEBOXQ9HB31 216 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-204ENST00000397606 LINC00312Q9Y6C7 94 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 C5orf63A6NC05 138 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ADAP1O75689 374 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 IGLV1-44P01699 117 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ETFRF1Q6IPR1 90 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ALKAL2Q6UX46 152 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 MRGPRFQ96AM1 343 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 SIRT7Q9NRC8 400 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 FAM157AC9JC47 383 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 C12orf77C9JDV5 145 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 FAM106CPP0CH98 169 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM267Q0VDI3 215 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-204ENST00000397606 NCR3LG1Q68D85 454 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 SPNS3Q6ZMD2 512 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ADAD2Q8NCV1 583 aaKnown RBP6.98□□□□□ -1.29
PTPRD-204ENST00000397606 OR2G3Q8NGZ4 309 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 FAM213BQ8TBF2 198 aa6.98□□□□□ -1.29
PTPRD-204ENST00000397606 NPDC1Q9NQX5 325 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-204ENST00000397606 ZFP92A6NM28 416 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 H0Y980 276 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 PTBP3O95758 552 aaKnown RBP6.97□□□□□ -1.29
PTPRD-204ENST00000397606 UCP3P55916 312 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 OR2B8PP59922 312 aa6.97□□□□□ -1.29
PTPRD-204ENST00000397606 NHLRC3Q5JS37 347 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 413.7 ms