RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 COL10A1Q03692 680 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM255AQ5JRV8 349 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 RIPPLY2Q5TAB7 128 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 C1QL3Q5VWW1 255 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 MDP1Q86V88 176 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 OR2D3Q8NGH3 330 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 OR10AC1Q8NH08 325 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A10PA6NDY2 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A18PA6NE21 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A16PA6NEW6 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A20PA6NIJ5 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A8PA6NJQ4 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A7PA6NKC0 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A22PA8MWA6 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A12PA8MX19 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A5PA8MXJ8 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A23PA8MXZ1 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A15PP0C7V4 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A13PP0C7W8 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A14PP0C7W9 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FAM90A24PP0C7X0 464 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 PSG2P11465 335 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SPNS2Q8IVW8 549 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 BVESQ8NE79 360 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 DSPPQ9NZW4 1301 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 DOCK9Q9BZ29 2069 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 MEX3AA1L020 520 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 AGFG2O95081 481 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 VSIG8P0DPA2 414 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 FSTP19883 344 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 MMDQ15546 238 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 C3AR1Q16581 482 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 OR11H7Q8NGC8 314 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 PITPNC1Q9UKF7 332 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 WNT9BO14905 357 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 WISP3O95389 354 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 GAPDHP04406 335 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SPANXN1Q5VSR9 72 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 MARS2Q96GW9 593 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 ABHD14BQ96IU4 210 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 ATG101Q9BSB4 218 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 AKAP6Q13023 2319 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TEX30Q5JUR7 227 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SF3B6Q9Y3B4 125 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SS18L1O75177 396 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 PPOXP50336 477 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 DLX1P56177 255 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM30BQ3MIR4 351 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 LYZL2Q7Z4W2 148 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 OR10J1P30954 320 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 IRF3Q14653 427 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 AWAT1Q58HT5 328 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 STPG1Q5TH74 334 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SIGIRRQ6IA17 410 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SSMEM1Q8WWF3 244 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TNFSF18Q9UNG2 199 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZSWIM8A7E2V4 1837 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 CEACAM18A8MTB9 384 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SNRPEP62304 92 aaKnown RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ROM1Q03395 351 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 HLA-DRB5Q30154 266 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM91Q6ZNR0 172 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 GPX7Q96SL4 187 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PCGF1Q9BSM1 259 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 LPAR5Q9H1C0 372 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MSL2Q9HCI7 577 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 WIPI2Q9Y4P8 454 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 CBY3A6NI87 242 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PTGDSP41222 190 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 LIMS1P48059 325 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 SLC22A18ASQ8N1D0 253 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 FAM222BQ8WU58 562 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 METTL26Q96S19 204 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MGST3O14880 152 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PTP4A3O75365 173 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF735P0CB33 412 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF273Q14593 569 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 TWIST1Q15672 202 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 GBGT1Q8N5D6 347 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ADAMTS17Q8TE56 1095 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 LINC00052Q96N35 136 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PPC1 479 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 NPIPB13A6NJU9 1138 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 NPIPB4C9JG80 1138 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PSG4Q00888 419 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 GCSAMQ8N6F7 178 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 DNASE2BQ8WZ79 361 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 OR2V2Q96R30 315 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MIEN1Q9BRT3 115 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 MS4A7Q9GZW8 240 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 LEUTXA8MZ59 168 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 CLDN14O95500 239 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 APCSP02743 223 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 HIST3H3Q16695 136 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 STARD4Q96DR4 205 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF385AQ96PM9 386 aaKnown RBP4.74□□□□□ -1.65
VPS13C-204ENST00000395898 PAXXQ9BUH6 204 aa4.74□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms