RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CALHM2Q9HA72 323 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 PARD6AQ9NPB6 346 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 SELENOKQ9Y6D0 94 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 LAMA5O15230 3695 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 IGSF23A1L1A6 192 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 RPLP1P05386 114 aaKnown RBP13.24□□□□□ -0.29
PTBP1-204ENST00000394601 NOL4LQ96MY1 436 aaPredicted RBP13.24□□□□□ -0.29
PTBP1-204ENST00000394601 OR5B12Q96R08 314 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 FAM103A1Q9BTL3 118 aaKnown RBP13.24□□□□□ -0.29
PTBP1-204ENST00000394601 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 K7N7A8 449 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 EGR1P18146 543 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 TDGF1P3P51864 188 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 ARF1P84077 181 aaKnown RBP13.24□□□□□ -0.29
PTBP1-204ENST00000394601 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 LIAT1Q6ZQX7 453 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 TECTBQ96PL2 329 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 TP53RKQ96S44 253 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 CCL2P13500 99 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 AADACP22760 399 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 NKX2-1P43699 371 aaPredicted RBP13.24□□□□□ -0.29
PTBP1-204ENST00000394601 C16orf82Q7Z2V1 217 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 C11orf42Q8N5U0 333 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 GINS3Q9BRX5 216 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 PLK3Q9H4B4 646 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 TMED3Q9Y3Q3 217 aa13.24□□□□□ -0.29
PTBP1-204ENST00000394601 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 NAPSAO96009 420 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF883P0CG24 379 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 TNFSF10P50591 281 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 SLC25A26Q70HW3 274 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 OR4D5Q8NGN0 318 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 BCL3P20749 454 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF787Q6DD87 383 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF695Q8IW36 515 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM256Q8N2U0 113 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 ZPBPQ9BS86 351 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 DOCK7Q96N67 2140 aa13.23□□□□□ -0.29
PTBP1-204ENST00000394601 A0A096LPE4 126 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 H7BYZ3 331 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 DEFA4P12838 97 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 UCP2P55851 309 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
PTBP1-204ENST00000394601 OR56B2PQ8NGI1 322 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 MTCH1Q9NZJ7 389 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 DUSP1P28562 367 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 COTL1Q14019 142 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 ST6GALNAC3Q8NDV1 305 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 PRRC2CQ9Y520 2896 aaKnown RBP13.22□□□□□ -0.29
PTBP1-204ENST00000394601 NBEAQ8NFP9 2946 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 IAPPP10997 89 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 MAGEA5P43359 124 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF266Q14584 549 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTBP1-204ENST00000394601 IQCJQ1A5X6 159 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 TTTY12Q9BZ98 90 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF286AQ9HBT8 521 aa13.22□□□□□ -0.29
PTBP1-204ENST00000394601 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 MRPL33O75394 65 aaKnown RBP13.21□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF16P17020 682 aaPredicted RBP13.21□□□□□ -0.29
PTBP1-204ENST00000394601 GALR1P47211 349 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 HERV-K104P61576 105 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 OR5R1Q8NH85 324 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 KIAA1456Q9P272 454 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 BOKQ9UMX3 212 aaPredicted RBP13.21□□□□□ -0.29
PTBP1-204ENST00000394601 AHCTF1Q8WYP5 2266 aa13.21□□□□□ -0.29
PTBP1-204ENST00000394601 DVL1O14640 695 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 ADAM20O43506 726 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 LILRA1O75019 489 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 NGFP01138 241 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 PPYP01298 95 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 SRYQ05066 204 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 MALLQ13021 153 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 C9orf135Q5VTT2 229 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 ODF3L1Q8IXM7 274 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 NEK7Q8TDX7 302 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.3
PTBP1-204ENST00000394601 DSPP15924 2871 aaKnown RBP13.21□□□□□ -0.3
PTBP1-204ENST00000394601 LNP1A1A4G5 178 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A8PA6NJQ4 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A22PA8MWA6 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
PTBP1-204ENST00000394601 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms