RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 HELZP42694 1942 aaKnown RBP12.31□□□□□ -0.44
RTF1-201ENST00000389629 SHISA7A6NL88 538 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 CLDND2Q8NHS1 167 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 ABHD5Q8WTS1 349 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 GTF3AQ92664 365 aaKnown RBP12.31□□□□□ -0.44
RTF1-201ENST00000389629 B3GAT1Q9P2W7 334 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 M0R2Z0 102 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 USF1P22415 310 aaPredicted RBP12.3□□□□□ -0.44
RTF1-201ENST00000389629 MPZP25189 248 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 TAS2R45P59539 299 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 OR8B8Q15620 311 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 ATP6V1FQ16864 119 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 DCAF12Q5T6F0 453 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 RHBDD1Q8TEB9 315 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
RTF1-201ENST00000389629 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
RTF1-201ENST00000389629 A6NNC1 897 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 OPN3Q9H1Y3 402 aaPredicted RBP12.3□□□□□ -0.44
RTF1-201ENST00000389629 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 ZNF319Q9P2F9 582 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 HPRT1P00492 218 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 JOSD1Q15040 202 aaPredicted RBP12.3□□□□□ -0.44
RTF1-201ENST00000389629 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 ASPHD2Q6ICH7 369 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 P2RX4Q99571 388 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 SNRNP200O75643 2136 aaKnown RBP12.3□□□□□ -0.44
RTF1-201ENST00000389629 M0R1X1 148 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 RAC3P60763 192 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 TAAR6Q96RI8 345 aa12.3□□□□□ -0.44
RTF1-201ENST00000389629 DOCK9Q9BZ29 2069 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 K7N7A8 449 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 SRFP11831 508 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 ARR3P36575 388 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 CARFQ8N187 725 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 TRIB1Q96RU8 372 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 NPIPB7O75200 414 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 KBTBD11O94819 623 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 SRP14P37108 136 aaKnown RBP12.29□□□□□ -0.44
RTF1-201ENST00000389629 WNT5AP41221 380 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 RAB7AP51149 207 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 S1PR3Q99500 378 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 OR2H1Q9GZK4 316 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 PLXNA4Q9HCM2 1894 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 GNG10P50151 68 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 PAFAH1B2P68402 229 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 HS3ST3B1Q9Y662 390 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 PDE6DO43924 150 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 FAM27BQ5VT28 67 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 OR10S1Q8NGN2 331 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
RTF1-201ENST00000389629 KLF2Q9Y5W3 355 aaPredicted RBP12.29□□□□□ -0.44
RTF1-201ENST00000389629 A0A0J9YW62 118 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 PGLYRP1O75594 196 aaPredicted RBP12.28□□□□□ -0.44
RTF1-201ENST00000389629 CELA2AP08217 269 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 CHRNB4P30926 498 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 SRSF4Q08170 494 aaKnown RBP12.28□□□□□ -0.44
RTF1-201ENST00000389629 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
RTF1-201ENST00000389629 FAM173AQ9BQD7 235 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 SDF2L1Q9HCN8 221 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 PLXNB3Q9ULL4 1909 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 IGHEP01854 428 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 AMBPP02760 352 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
RTF1-201ENST00000389629 MRGPRDQ8TDS7 321 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 TRAV38-1A0A0B4J264 116 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 BRS3P32247 399 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 IGKV3D-11A0A0A0MRZ8 115 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 NPIPB4C9JG80 1138 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 CBLN1P23435 193 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 NPBWR2P48146 333 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 PLGLAQ15195 96 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
RTF1-201ENST00000389629 HIST3H3Q16695 136 aa12.27□□□□□ -0.44
RTF1-201ENST00000389629 C1QL4Q86Z23 238 aa12.27□□□□□ -0.44
RTF1-201ENST00000389629 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.44
RTF1-201ENST00000389629 CD99P14209 185 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 TNFSF10P50591 281 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 RHOBP62745 196 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 PSG4Q00888 419 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 OR5R1Q8NH85 324 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 CORO2AQ92828 525 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 IMMP2LQ96T52 175 aa12.27□□□□□ -0.45
RTF1-201ENST00000389629 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms