RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 WFIKKN1Q96NZ8 548 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 PLSCR2Q9NRY7 297 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 WNT16Q9UBV4 365 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 A0A1B0GTL3 188 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 HYPMO75409 117 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 ADTRPQ96IZ2 230 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 FOXI3A8MTJ6 420 aaPredicted RBP10.84□□□□□ -0.67
CHD3-203ENST00000380358 GLULP15104 373 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 DCAF12L2Q5VW00 463 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 ITLN1Q8WWA0 313 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 VGLL1Q99990 258 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 MANBALQ9NQG1 85 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 FOXB2Q5VYV0 432 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 ZDHHC22Q8N966 263 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 AKIP1Q9NQ31 210 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 ZNF275Q9NSD4 429 aaPredicted RBP10.84□□□□□ -0.67
CHD3-203ENST00000380358 TMEM160Q9NX00 188 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 K7N7A8 449 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 SLC35E3Q7Z769 313 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 TRGV2A0A075B6R0 118 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 PLP1P60201 277 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 PCOLCEQ15113 449 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 FGF11Q92914 225 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
CHD3-203ENST00000380358 A0A1W2PS18 150 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 Q9N2K0 584 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 PRR19A6NJB7 356 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 SLC25A17O43808 307 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 ABLIM2Q6H8Q1 611 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 RNF122Q9H9V4 155 aa10.84□□□□□ -0.67
CHD3-203ENST00000380358 SFTPCP11686 197 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 JMJD6Q6NYC1 403 aaPredicted RBP10.83□□□□□ -0.68
CHD3-203ENST00000380358 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 MBD1Q9UIS9 605 aaPredicted RBP10.83□□□□□ -0.68
CHD3-203ENST00000380358 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 PGPA6NDG6 321 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 Q6ZNX1 250 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 ZNF383Q8NA42 475 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 OR5AN1Q8NGI8 311 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 LINC01587Q99440 93 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
CHD3-203ENST00000380358 SYT11Q9BT88 431 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 PRNDQ9UKY0 176 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 TCRBV16S1A1N1A0A5B0 115 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 MPC2O95563 127 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 SRD5A1P18405 259 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 GAGE10A6NGK3 116 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 REC114Q7Z4M0 266 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 M0R381 172 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 DLL1O00548 723 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 RPL27AP46776 148 aaKnown RBP10.83□□□□□ -0.68
CHD3-203ENST00000380358 SLC25A42Q86VD7 318 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 ARRDC1Q8N5I2 433 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 ZNF707Q96C28 371 aaPredicted RBP10.83□□□□□ -0.68
CHD3-203ENST00000380358 SLC6A13Q9NSD5 602 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 OR2W1Q9Y3N9 320 aa10.83□□□□□ -0.68
CHD3-203ENST00000380358 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 SNAI2O43623 268 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 CXorf1O96002 111 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 RELQ04864 619 aaPredicted RBP10.82□□□□□ -0.68
CHD3-203ENST00000380358 AWAT1Q58HT5 328 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 MRPL24Q96A35 216 aaKnown RBP10.82□□□□□ -0.68
CHD3-203ENST00000380358 OR8D4Q8NGM9 314 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 WNT10AQ9GZT5 417 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 SIGLEC7Q9Y286 467 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 A0A1B0GX12 115 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 ALX3O95076 343 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 OR2H1Q9GZK4 316 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
CHD3-203ENST00000380358 FTH1P19P0C7X4 201 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 CD99P14209 185 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 GDF9O60383 454 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 CEACAM4O75871 244 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 OR10J1P30954 320 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 RAC3P60763 192 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 LINC01555Q8NAE3 123 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 PDFQ9HBH1 243 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 MPC1Q9Y5U8 109 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
CHD3-203ENST00000380358 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 IGHV3-11P01762 117 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 RND2P52198 227 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 MVDP53602 400 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 EFNB1P98172 346 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 ESPL1Q14674 2120 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 SRSF12Q8WXF0 261 aaKnown RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 SIGLEC5O15389 551 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 F12P00748 615 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms