RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF724A8MTY0 619 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 IGHV3-13P01766 116 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 IGHV3-7P01780 117 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 FCGR3AP08637 254 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SCTP09683 121 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 METTL15P1P0C7V9 234 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 CEACAM1P13688 526 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 CD82P27701 267 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 PIGPP57054 158 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 THAP6Q8TBB0 222 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SSC4DQ8WTU2 575 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 NDUFAF3Q9BU61 184 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 ZFYVE26Q68DK2 2539 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 CACNA1AO00555 2505 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 WDR1O75083 606 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 RP2O75695 350 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 HLA-GP17693 338 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 PPP1CBP62140 327 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 SSBP1Q04837 148 aaKnown RBP9.21□□□□□ -0.94
NEDD9-201ENST00000379433 OR8B8Q15620 311 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 PYY3Q5JQD4 70 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 HOGA1Q86XE5 327 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 BCL2L2Q92843 193 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-201ENST00000379433 TMEM230Q96A57 120 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 SARAFQ96BY9 339 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 GMPPAQ96IJ6 420 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-201ENST00000379433 PRDM14Q9GZV8 571 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 HEXA-AS1Q9H8Q6 139 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 LSM5Q9Y4Y9 91 aaKnown RBP9.21□□□□□ -0.94
NEDD9-201ENST00000379433 MAB21L2Q9Y586 359 aa9.21□□□□□ -0.94
NEDD9-201ENST00000379433 A0A0B4J2A0 478 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 TRBV7-9A0A0J9YWB2 115 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 TUBAL3A6NHL2 446 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 MBPP02686 304 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 MPV17P39210 176 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 KIR2DL2P43627 348 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 GATA4P43694 442 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 RBM11P57052 281 aaKnown RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 TAS2R46P59540 309 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 TMEM128Q5BJH2 165 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 NSUN5P2Q63ZY6 315 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 GSG1LQ6UXU4 331 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 SHPKQ9UHJ6 478 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 HSD17B6O14756 317 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 WNT9BO14905 357 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 CD37P11049 281 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 CHATP28329 748 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 PEG10Q86TG7 708 aaKnown RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 GPR137Q96N19 417 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 RTBDNQ9BSG5 229 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 LINC00470Q9BZP3 86 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 TRAV14DV4A0A0A6YYC5 116 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 PDCD6O75340 191 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 FUT3P21217 361 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 ASCL1P50553 236 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 HERV-K104P61576 105 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 NAAAQ02083 359 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 OR5I1Q13606 314 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 FAM58AQ8N1B3 248 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 INO80EQ8NBZ0 244 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 PARP12Q9H0J9 701 aaKnown RBP9.2□□□□□ -0.94
NEDD9-201ENST00000379433 GPR132Q9UNW8 380 aa9.2□□□□□ -0.94
NEDD9-201ENST00000379433 M0R1B8 84 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 TIMM8AO60220 97 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 OR2A4O95047 310 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 ARF6P62330 175 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 OR1L6Q8NGR2 347 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 CXorf58Q96LI9 332 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 OR2A7Q96R45 310 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 METTL1Q9UBP6 276 aaKnown RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 PHF1O43189 567 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF728P0DKX0 622 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 CEACAM21Q3KPI0 293 aa9.19□□□□□ -0.94
NEDD9-201ENST00000379433 FAM53AQ6NSI3 398 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 ADAT1Q9BUB4 502 aaKnown RBP9.19□□□□□ -0.94
NEDD9-201ENST00000379433 OR5AC1P0C628 307 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 FAM87AP0C7U9 286 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF14P17017 642 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 AADACP22760 399 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 IAH1Q2TAA2 248 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 SMIM21Q3B7S5 101 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 NHLRC2Q8NBF2 726 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 RTN4IP1Q8WWV3 396 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 TSNAXQ99598 290 aaKnown RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF286AQ9HBT8 521 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 NPTNQ9Y639 398 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ANKHD1Q8IWZ3 2542 aaKnown RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 CACNA1BQ00975 2339 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ARFGEF3Q5TH69 2177 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 RAB5CP51148 216 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 AKR1C2P52895 323 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 UCP2P55851 309 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ATP5IP56385 69 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms