RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CACNG5Q9UF02 275 aa6.99□□□□□ -1.29
PTPRR-203ENST00000378778 TRIOBPQ9H2D6 2365 aa6.99□□□□□ -1.29
PTPRR-203ENST00000378778 TDRD6O60522 2096 aaKnown RBP6.99□□□□□ -1.29
PTPRR-203ENST00000378778 TRAPPC2LH3BP13 241 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 MPDU1O75352 247 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 SCTP09683 121 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 GLB1P16278 677 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 FGF8P55075 233 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ELLP55199 621 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 CEACAM21Q3KPI0 293 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 NKAIN1Q4KMZ8 207 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 FAM69BQ5VUD6 431 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 SSX7Q7RTT5 188 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 HAPLN4Q86UW8 402 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF709Q8N972 641 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 OR10G9Q8NGN4 311 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 OR10G7Q8NGN6 311 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 OR2AE1Q8NHA4 323 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 PIGCQ92535 297 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 NAT6Q93015 286 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 RPUSD4Q96CM3 377 aaKnown RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF385AQ96PM9 386 aaKnown RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 RASL10BQ96S79 203 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 TBX15Q96SF7 602 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 DEFB126Q9BYW3 111 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 HSPB7Q9UBY9 170 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZFP30Q9Y2G7 519 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 CHCHD2Q9Y6H1 151 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 RANBP2P49792 3224 aaKnown RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF705FA8MVS1 300 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 UMODP07911 640 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 CD55P08174 381 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF705DP0CH99 300 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF705BP0CI00 300 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-203ENST00000378778 LIFP15018 202 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 G0S2P27469 103 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 CADM4Q8NFZ8 388 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 FAM216AQ8WUB2 273 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF581Q9P0T4 197 aa6.98□□□□□ -1.29
PTPRR-203ENST00000378778 MYO7AQ13402 2215 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 SAA2-SAA4A0A096LPE2 208 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 A0A0U1RQK1 487 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF320A2RRD8 509 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF205O95201 554 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MT-ND6P03923 174 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 IL6RP08887 468 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 PSG2P11465 335 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF32P17041 273 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MDKP21741 143 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 BRS3P32247 399 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MRPS11P82912 194 aaKnown RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ARL16Q0P5N6 197 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF705AQ6ZN79 300 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 C16orf47Q6ZP98 133 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 NUFIP2Q7Z417 695 aaKnown RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 LINC01551Q86U37 167 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 RPS19BP1Q86WX3 136 aaKnown RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 WDR31Q8NA23 367 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 OR2D3Q8NGH3 330 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 PKIBQ9C010 78 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 WNT5BQ9H1J7 359 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ELOVL5Q9NYP7 299 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ARL2-SNX15V9GYD0 113 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 FER1L5A0AVI2 2057 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 SHANK1Q9Y566 2161 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 IGHV3-20A0A0C4DH32 117 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 A0A0G2JRQ6 117 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MDFIC2A0A1B0GVS7 189 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 OR5B21A6NL26 309 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 SLC33A1O00400 549 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 CA3P07451 260 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MPLP40238 635 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 OR1D5P58170 312 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 GNB2P62879 340 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 PSG4Q00888 419 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM31Q5JXX7 168 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ZDHHC23Q8IYP9 409 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 NECAP1Q8NC96 275 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 PSMF1Q92530 271 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM45BQ96B21 275 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ATG101Q9BSB4 218 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 LPAR2Q9HBW0 351 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MSL2Q9HCI7 577 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 TRAV39A0A0B4J263 110 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 C11orf94C9JXX5 98 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 CBR3O75828 277 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 BCL3P20749 454 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 CD1BP29016 333 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 RPL29P47914 159 aaKnown RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 NXPH1P58417 271 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 TPTE2P1Q5T6R2 138 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 BRICD5Q6PL45 260 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms