RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 EPHA8P29322 1005 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 CD300LDQ6UXZ3 194 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 ANAPC13Q9BS18 74 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 CRYBG1Q9Y4K1 1723 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 FTH1P19P0C7X4 201 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 SELENOPP49908 381 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM95Q3KNT9 176 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 ACVR1Q04771 509 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 KLF9Q13886 244 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF324BQ6AW86 544 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 CD3EP07766 207 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM50BP56557 158 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 NAAAQ02083 359 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 FAM71F2Q6NXP2 309 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 OTPQ5XKR4 325 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 LAMTOR1Q6IAA8 161 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 GPR82Q96P67 336 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 COL16A1Q07092 1604 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 HMX2A2RU54 273 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 RNFT1Q5M7Z0 435 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 LPAR2Q9HBW0 351 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 RFLNAQ6ZTI6 216 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 H7C1H1 209 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 K7N7A8 449 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 OR6X1Q8NH79 312 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 HDHD3Q9BSH5 251 aaPredicted RBP10.22□□□□□ -0.77
VPS13A-205ENST00000376636 SMOC1Q9H4F8 434 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 RGPD4Q7Z3J3 1758 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 CEACAM18A8MTB9 384 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 LOXL3P58215 753 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 OVCH2Q7RTZ1 564 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 RHOVQ96L33 236 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF714Q96N38 554 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 LINC00470Q9BZP3 86 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 PLCH1Q4KWH8 1693 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
VPS13A-205ENST00000376636 SBK3P0C264 359 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 OR8G5Q8NG78 346 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 FOXJ2Q9P0K8 574 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 KCPQ6ZWJ8 1503 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 OR2A4O95047 310 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM50AO95807 157 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 CFDP00746 253 aaPredicted RBP10.22□□□□□ -0.77
VPS13A-205ENST00000376636 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
VPS13A-205ENST00000376636 MPLP40238 635 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM177Q53S58 311 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 XAF1Q6GPH4 301 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 SH2D5Q6ZV89 423 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF414Q96IQ9 312 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 OR2A7Q96R45 310 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 GVQW1Q8N7I0 195 aa10.22□□□□□ -0.77
VPS13A-205ENST00000376636 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.77
VPS13A-205ENST00000376636 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 ANOS1P23352 680 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 BHLHA15Q7RTS1 189 aaPredicted RBP10.21□□□□□ -0.77
VPS13A-205ENST00000376636 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 NPFFO15130 113 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 MMDQ15546 238 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF56Q15929 161 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 PQLC2Q6ZP29 291 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.77
VPS13A-205ENST00000376636 GLULP15104 373 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 ARAP2Q8WZ64 1704 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 PTP4A1Q93096 173 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 TNFRSF19Q9NS68 423 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 H0Y8X5 98 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 SRD5A2P31213 254 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 NUBP1P53384 320 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 RTN4RL1Q86UN2 441 aaPredicted RBP10.21□□□□□ -0.78
VPS13A-205ENST00000376636 HPRT1P00492 218 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 PXMP4Q9Y6I8 212 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 TRGC2P03986 189 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.78
VPS13A-205ENST00000376636 ZNF117Q03924 483 aa10.21□□□□□ -0.78
VPS13A-205ENST00000376636 LMO7DNF2Z398 122 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 GAPDHP04406 335 aaKnown RBP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 TRA2AQ13595 282 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 DSPPQ9NZW4 1301 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 PLPP3O14495 311 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 ALPK2Q86TB3 2170 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 IGHV3-13P01766 116 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 ASB10Q8WXI3 467 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 ABHD1Q96SE0 405 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 C6orf106Q9H6K1 298 aaPredicted RBP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 NOTCH3Q9UM47 2321 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 DNASE2BQ8WZ79 361 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 NEU1Q99519 415 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
VPS13A-205ENST00000376636 SSPNQ14714 243 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 OR1K1Q8NGR3 316 aa10.2□□□□□ -0.78
VPS13A-205ENST00000376636 ZBP1Q9H171 429 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms