RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 EPHA1P21709 976 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ID3Q02535 119 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF616Q08AN1 781 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF266Q14584 549 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 CDSNQ15517 529 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 PRAMEF6Q5VXH4 476 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 BTNL8Q6UX41 500 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 DOLPP1Q86YN1 238 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 SPAG16Q8N0X2 631 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MBD3L2Q8NHZ7 208 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 AKR1E2Q96JD6 320 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 HES4Q9HCC6 221 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 WIPI2Q9Y4P8 454 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 A1L4Q6 167 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 RNASEK-C17orf49H0YIS7 233 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 CHST1O43916 411 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 PSPNO60542 156 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 DANCRP0C864 163 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 MUC1P15941 1255 aaPredicted RBP10.17□□□□□ -0.78
HMGCL-202ENST00000374487 ADCYAP1P18509 176 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 CAMLGP49069 296 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 C11orf53Q8IXP5 236 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 C1orf174Q8IYL3 243 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 GALMQ96C23 342 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 TLNRD1Q9H1K6 362 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 POLEQ07864 2286 aa10.17□□□□□ -0.78
HMGCL-202ENST00000374487 A0A1B0GU03 582 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 ZG16O60844 167 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 HEXAP06865 529 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 RAB5CP51148 216 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 HMGN3Q15651 99 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 GUCA2BQ16661 112 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 KRTCAP3Q53RY4 240 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 HIVEP3Q5T1R4 2406 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 WDR82Q6UXN9 313 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 Q6ZR03 302 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 SEM1Q6ZVN7 128 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 SEC11CQ9BY50 192 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 SH3BGRL3Q9H299 93 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF835Q9Y2P0 537 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 CCL21O00585 134 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 CST7O76096 145 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 IGLV2-14P01704 120 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 MMP9P14780 707 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 LMO1P25800 156 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 IL2RGP31785 369 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 CD80P33681 288 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 AESQ08117 197 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 MZT1Q08AG7 82 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 MBNL2Q5VZF2 373 aaKnown RBP10.16□□□□□ -0.78
HMGCL-202ENST00000374487 ACP7Q6ZNF0 438 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 PUSL1Q8N0Z8 303 aaKnown RBP10.16□□□□□ -0.78
HMGCL-202ENST00000374487 TMEM217Q8N7C4 229 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
HMGCL-202ENST00000374487 DUSP13Q9UII6 198 aa10.16□□□□□ -0.78
HMGCL-202ENST00000374487 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
HMGCL-202ENST00000374487 DNASE2O00115 360 aaPredicted RBP10.15□□□□□ -0.78
HMGCL-202ENST00000374487 PITX3O75364 302 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 GABRA2P47869 451 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 OR3A1P47881 315 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF83P51522 516 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 DVL1P1P54792 670 aaPredicted RBP10.15□□□□□ -0.78
HMGCL-202ENST00000374487 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
HMGCL-202ENST00000374487 SMIM21Q3B7S5 101 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 MIDNQ504T8 468 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 C10orf91Q5T1B1 145 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 OR2Z1Q8NG97 314 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 NINJ1Q92982 152 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
HMGCL-202ENST00000374487 SLC25A15Q9Y619 301 aa10.15□□□□□ -0.78
HMGCL-202ENST00000374487 A0A0G2JRQ6 117 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 OOEPA6NGQ2 149 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 FAM74A7A6NL05 159 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 RNF212BA8MTL3 300 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 SNAPINO95295 136 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 SFTA3P0C7M3 94 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 SLC25A6P12236 298 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 COL8A1P27658 744 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 CA7P43166 264 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 BAXQ07812 192 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 SLC35E4Q6ICL7 350 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 DRAM1Q8N682 238 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 FAM169BQ8N8A8 192 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 OR1L1Q8NH94 360 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 LYPD6BQ8NI32 183 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.79
HMGCL-202ENST00000374487 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
HMGCL-202ENST00000374487 M0R1B8 84 aa10.14□□□□□ -0.79
HMGCL-202ENST00000374487 PTBP3O95758 552 aaKnown RBP10.14□□□□□ -0.79
HMGCL-202ENST00000374487 TMEM50AO95807 157 aa10.14□□□□□ -0.79
HMGCL-202ENST00000374487 WNT2P09544 360 aa10.14□□□□□ -0.79
HMGCL-202ENST00000374487 FHITP49789 147 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms