RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF16P17020 682 aaPredicted RBP16.34■□□□□ 0.21
HDAC1-201ENST00000373548 TNFSF4P23510 183 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ID3Q02535 119 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 PPP1R35Q8TAP8 253 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 GPR146Q96CH1 333 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 MAGT1Q9H0U3 335 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 PLEKHF2Q9H8W4 249 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 PIGBOS1A0A0B4J2F0 54 aa16.33■□□□□ 0.21
HDAC1-201ENST00000373548 K7N7A8 449 aa16.33■□□□□ 0.21
HDAC1-201ENST00000373548 OR4A8P0C604 315 aa16.33■□□□□ 0.21
HDAC1-201ENST00000373548 FAM157CP0CG43 387 aa16.33■□□□□ 0.21
HDAC1-201ENST00000373548 EIF4E3Q8N5X7 224 aaKnown RBP16.33■□□□□ 0.21
HDAC1-201ENST00000373548 RAI1Q7Z5J4 1906 aaPredicted RBP16.33■□□□□ 0.2
HDAC1-201ENST00000373548 IGHV3-43A0A0B4J1X8 118 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 SSSCA1O60232 199 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 PITX3O75364 302 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 JTBO76095 146 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 IGHV3-43DP0DP04 118 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 EPHA1P21709 976 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 ADAM5Q6NVV9 412 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 ZBTB34Q8NCN2 500 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 LRRC20Q8TCA0 184 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 RNF141Q8WVD5 230 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 WFDC1Q9HC57 220 aa16.33■□□□□ 0.2
HDAC1-201ENST00000373548 POLEQ07864 2286 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 SPINT2O43291 252 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 CYB5R3P00387 301 aaPredicted RBP16.32■□□□□ 0.2
HDAC1-201ENST00000373548 SLC25A6P12236 298 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 NHLH2Q02577 135 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 KLRB1Q12918 225 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 EIF4EBP1Q13541 118 aaPredicted RBP16.32■□□□□ 0.2
HDAC1-201ENST00000373548 IZUMO4Q1ZYL8 232 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 Q8TCH9 128 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 SESN1Q9Y6P5 492 aa16.32■□□□□ 0.2
HDAC1-201ENST00000373548 USF3Q68DE3 2245 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 A0A1B0GU03 582 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 RNF212BA8MTL3 300 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 SHOXO15266 292 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 NXPH3O95157 252 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 IGKV1-5P01602 117 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 SELLP14151 372 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 HTD2P86397 168 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 CR1LQ2VPA4 569 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 TGIF2LYQ8IUE0 185 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 CCDC28AQ8IWP9 274 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 OR2C3Q8N628 320 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 OR1S2Q8NGQ3 325 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 LSM10Q969L4 123 aaKnown RBP16.31■□□□□ 0.2
HDAC1-201ENST00000373548 DSCAML1Q8TD84 2053 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 FAM24AA6NFZ4 105 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 LGALS8O00214 317 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 PVALBP20472 110 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-201ENST00000373548 EWSR1Q01844 656 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC1-201ENST00000373548 STUMQ69YW2 141 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 Q6ZRM9 215 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 ZNF808Q8N4W9 903 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-201ENST00000373548 UBAC2Q8NBM4 344 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 LINC00052Q96N35 136 aa16.31■□□□□ 0.2
HDAC1-201ENST00000373548 SPTA1P02549 2419 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 IGSF23A1L1A6 192 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 DEFB108AA8MXU0 73 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 TMEM50AO95807 157 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ADH4P08319 380 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 GZMHP20718 246 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 CA7P43166 264 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 RNASE11Q8TAA1 199 aaKnown RBP16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ARV1Q9H2C2 271 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ROS1P08922 2347 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 DIDO1Q9BTC0 2240 aaKnown RBP16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ZP3P21754 424 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 CASP6P55212 293 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 EDDM3BP56851 147 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 RPL30P62888 115 aaKnown RBP16.3■□□□□ 0.2
HDAC1-201ENST00000373548 CCL8P80075 99 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 MSMO1Q15800 293 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 EIF5AL1Q6IS14 154 aaKnown RBP16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ZNF561Q8N587 486 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 SDSLQ96GA7 329 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 LYRM2Q9NU23 88 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-201ENST00000373548 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 TAS2R3Q9NYW6 316 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 PLA2G2EQ9NZK7 142 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
HDAC1-201ENST00000373548 ZZEF1O43149 2961 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 C17orf100A8MU93 164 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 KIAA1324LA8MWY0 1029 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-201ENST00000373548 FBXO24O75426 580 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 CD55P08174 381 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 CAV2P51636 162 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 AKR1C2P52895 323 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 VAMP2P63027 116 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 LTC4SQ16873 150 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 DUX4L9Q6RFH8 374 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-201ENST00000373548 LPAR3Q9UBY5 353 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 CACNG5Q9UF02 275 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 TANC2Q9HCD6 1990 aa16.29■□□□□ 0.2
HDAC1-201ENST00000373548 ST8SIA5O15466 376 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 MMP9P14780 707 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 LPAR6P43657 344 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms