RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SOCS1O15524 211 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 DLX6P56179 175 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM211Q6ICI0 200 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TNRC6AQ8NDV7 1962 aaKnown RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 KISS1RQ969F8 398 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 HSPB7Q9UBY9 170 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 FNDC4Q9H6D8 234 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 GLULP15104 373 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 DSCR4P56555 118 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 SNAI3Q3KNW1 292 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM177Q53S58 311 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 BAHD1Q8TBE0 780 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-201ENST00000371817 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 LINC00470Q9BZP3 86 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 CASP8AP2Q9UKL3 1982 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 IGHV3-43A0A0B4J1X8 118 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 IGHV3-43DP0DP04 118 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 IFITM2Q01629 132 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 FAM53BQ14153 422 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 PXMP4Q9Y6I8 212 aa13.41□□□□□ -0.26
COL5A1-201ENST00000371817 FCGR2BP31994 310 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 SLC26A1Q9H2B4 701 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 CLN8Q9UBY8 286 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 TRAV8-6A0A0B4J262 113 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 LRRC75BQ2VPJ9 315 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 MVB12AQ96EY5 273 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 PHLDA3Q9Y5J5 127 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 CEACAM3P40198 252 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 ZNF117Q03924 483 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 FOXB1Q99853 325 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 ASCL4Q6XD76 172 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 WFDC8Q8IUA0 241 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 IL36RNQ9UBH0 155 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 CFDP00746 253 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 PRR35P0CG20 571 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 ZBTB34Q8NCN2 500 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 COA4Q9NYJ1 87 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 TBC1D29Q9UFV1 150 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 KLF13Q9Y2Y9 288 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-201ENST00000371817 RAC3P60763 192 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 DCAF12L2Q5VW00 463 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 COX11Q9Y6N1 276 aa13.4□□□□□ -0.26
COL5A1-201ENST00000371817 PRRG2O14669 202 aa13.4□□□□□ -0.27
COL5A1-201ENST00000371817 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.27
COL5A1-201ENST00000371817 DPTQ07507 201 aa13.4□□□□□ -0.27
COL5A1-201ENST00000371817 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.27
COL5A1-201ENST00000371817 HIGD1AQ9Y241 93 aa13.4□□□□□ -0.27
COL5A1-201ENST00000371817 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 A0A1B0GTH9 108 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 ALG1L2C9J202 215 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 C1QL1O75973 258 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 SLC25A30Q5SVS4 291 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 AQP10Q96PS8 301 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 TIMP4Q99727 224 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 IL23AQ9NPF7 189 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 SPTAN1Q13813 2472 aaKnown RBP13.39□□□□□ -0.27
COL5A1-201ENST00000371817 OR8B12Q8NGG6 310 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 LINC00869P0C866 280 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 CBLN1P23435 193 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 RUNX1Q01196 453 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 KIAA1644Q3SXP7 199 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 CNRIP1Q96F85 164 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 PSG2P11465 335 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 ZFP64Q9NPA5 681 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 A0A1W2PQM1 296 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 CXCL13O43927 109 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 DANCRP0C864 163 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 PRDX2P32119 198 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 HSF5Q4G112 596 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 LINC00596Q86U02 117 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 IP6K3Q96PC2 410 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 SPANXA1Q9NS26 97 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 RPS20P60866 119 aaKnown RBP13.38□□□□□ -0.27
COL5A1-201ENST00000371817 TMEM52BQ4KMG9 183 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
COL5A1-201ENST00000371817 LINC01387J3KSC0 135 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms