RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 HTN1P15515 57 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 NPAS1Q99742 590 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 ATP5SQ99766 215 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
NDC1-201ENST00000371429 FOXH1O75593 365 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 TEX261Q6UWH6 196 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 CLEC9AQ6UXN8 241 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 U3KQ87 197 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 TGOLN2O43493 480 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 LMX1BO60663 402 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 ALX3O95076 343 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 CD40P25942 277 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
NDC1-201ENST00000371429 RHOVQ96L33 236 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 GOLT1BQ9Y3E0 138 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 LOC102723996A0A087X1L8 192 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 SMAD7O15105 426 aaKnown RBP12.67□□□□□ -0.38
NDC1-201ENST00000371429 CPN1P15169 458 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 LY6DQ14210 128 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 FAM222BQ8WU58 562 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 STARD4Q96DR4 205 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 ZNF552Q9H707 407 aaPredicted RBP12.67□□□□□ -0.38
NDC1-201ENST00000371429 SCTP09683 121 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 CECR9P0C854 216 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 TMEM50BP56557 158 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
NDC1-201ENST00000371429 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 IGHMP01871 453 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 LIPFP07098 398 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
NDC1-201ENST00000371429 ADAD2Q8NCV1 583 aaKnown RBP12.67□□□□□ -0.38
NDC1-201ENST00000371429 OR4P4Q8NGL7 312 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 IDI2-AS1Q9NZ38 188 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 KLK13Q9UKR3 277 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 SULT1A1P50225 295 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 PSG5Q15238 335 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 PDZD11Q5EBL8 140 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 OR1L1Q8NH94 360 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 AICDAQ9GZX7 198 aa12.67□□□□□ -0.38
NDC1-201ENST00000371429 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
NDC1-201ENST00000371429 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 ZNF66Q6ZN08 573 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 LILRB1Q8NHL6 650 aaPredicted RBP12.66□□□□□ -0.38
NDC1-201ENST00000371429 LINC00052Q96N35 136 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
NDC1-201ENST00000371429 POLEQ07864 2286 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 B2MP61769 119 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 MMD2Q8IY49 270 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 PERPQ96FX8 193 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 FAM103A1Q9BTL3 118 aaKnown RBP12.66□□□□□ -0.38
NDC1-201ENST00000371429 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
NDC1-201ENST00000371429 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 TEPPQ6URK8 271 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
NDC1-201ENST00000371429 J3KRW8 73 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 CDK2AP1O14519 115 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 C1orf100Q5SVJ3 147 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 SCN5AQ14524 2016 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 DUXBA0A1W2PPF3 345 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 HAX1O00165 279 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 HPXP02790 462 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 SFTA3P0C7M3 94 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 FCER1GP30273 86 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 UNQ5815/PRO19632Q6UWF5 114 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 FA2HQ7L5A8 372 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 C1orf162Q8NEQ5 155 aaPredicted RBP12.65□□□□□ -0.38
NDC1-201ENST00000371429 ZNF586Q9NXT0 402 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 PTGDSP41222 190 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 BSPH1Q075Z2 132 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 LY6EQ16553 131 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 OR9G1Q8NH87 305 aa12.65□□□□□ -0.38
NDC1-201ENST00000371429 ESPL1Q14674 2120 aa12.65□□□□□ -0.39
NDC1-201ENST00000371429 HMSDA8MTL9 139 aa12.65□□□□□ -0.39
NDC1-201ENST00000371429 HSBP1O75506 76 aa12.65□□□□□ -0.39
NDC1-201ENST00000371429 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.39
NDC1-201ENST00000371429 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.39
NDC1-201ENST00000371429 ROS1P08922 2347 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 CALHM1Q8IU99 346 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms