RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SLC25A38Q96DW6 304 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 PEF1Q9UBV8 284 aaKnown RBP11.54□□□□□ -0.56
PTPRK-204ENST00000368210 TNFAIP6P98066 277 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-204ENST00000368210 TBC1D26Q86UD7 250 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 R3HDM4Q96D70 268 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 POM121L2Q96KW2 1035 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 SPSB2Q99619 263 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 KLK13Q9UKR3 277 aa11.54□□□□□ -0.56
PTPRK-204ENST00000368210 IGHV3-43A0A0B4J1X8 118 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 A0A1W2PN81 502 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 K7EQM0 130 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 IGHV3-43DP0DP04 118 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 FOLR2P14207 255 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 EGR4Q05215 589 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 MRGPRGQ86SM5 289 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 DOCK6Q96HP0 2047 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 VDAC1P21796 283 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 APOBEC4Q8WW27 367 aaKnown RBP11.53□□□□□ -0.56
PTPRK-204ENST00000368210 SLC26A1Q9H2B4 701 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 LRRC37A2A6NM11 1700 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 KCNAB3O43448 404 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 OR5AL1P0C617 328 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 PSG4Q00888 419 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 ADAD2Q8NCV1 583 aaKnown RBP11.53□□□□□ -0.56
PTPRK-204ENST00000368210 BEND2Q8NDZ0 799 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 ZNF519Q8TB69 540 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 TRBV5-7A0A0A0MS05 114 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 C17orf51A8MQB3 221 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 HPRT1P00492 218 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
PTPRK-204ENST00000368210 ISG15P05161 165 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 UNQ9370/PRO34162Q6UXP9 181 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 TPPP3Q9BW30 176 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 HIF1ANQ9NWT6 349 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
PTPRK-204ENST00000368210 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.56
PTPRK-204ENST00000368210 IGLV3-19P01714 112 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.56
PTPRK-204ENST00000368210 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 MYOZ1Q9NP98 299 aaPredicted RBP11.52□□□□□ -0.56
PTPRK-204ENST00000368210 VSIG10L2P0DP72 767 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.56
PTPRK-204ENST00000368210 SRP14P37108 136 aaKnown RBP11.52□□□□□ -0.56
PTPRK-204ENST00000368210 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 ADAMTS17Q8TE56 1095 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 SLC7A10Q9NS82 523 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.56
PTPRK-204ENST00000368210 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-204ENST00000368210 A0A1W2PP11 408 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 GAPTQ8N292 157 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 MRPL24Q96A35 216 aaKnown RBP11.52□□□□□ -0.57
PTPRK-204ENST00000368210 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 COL25A1Q9BXS0 654 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-204ENST00000368210 ZNF71Q9NQZ8 489 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-204ENST00000368210 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 ZNF835Q9Y2P0 537 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 TIAF1O95411 115 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 TNFSF10P50591 281 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 IL24Q13007 206 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 C1orf100Q5SVJ3 147 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 OR5D13Q8NGL4 314 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 CCL17Q92583 94 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 LHFPL6Q9Y693 200 aa11.52□□□□□ -0.57
PTPRK-204ENST00000368210 Q56UQ5 140 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 BHLHA15Q7RTS1 189 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-204ENST00000368210 MISP3Q96FF7 219 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 C14orf144Q96I85 54 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-204ENST00000368210 DEDDO75618 318 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 BPIFB3P59826 476 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-204ENST00000368210 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 TGFBR3LH3BV60 316 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 TCTAP57738 103 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 INO80CQ6PI98 192 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-204ENST00000368210 MDP1Q86V88 176 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 SLC25A40Q8TBP6 338 aa11.51□□□□□ -0.57
PTPRK-204ENST00000368210 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-204ENST00000368210 LMX1BO60663 402 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 HOXA6P31267 233 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 GLIPR1P48060 266 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 PCOLCEQ15113 449 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 VMA21Q3ZAQ7 101 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 WDR61Q9GZS3 305 aaKnown RBP11.5□□□□□ -0.57
PTPRK-204ENST00000368210 hADV38S2A0JD32 116 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 IGHV3-13P01766 116 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 IGHV3-7P01780 117 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 GYPAP02724 150 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 PRRX1P54821 245 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 MYPOPQ86VE0 399 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms