RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 OR10A7Q8NGE5 316 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 ZNF552Q9H707 407 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-205ENST00000367251 PARD6AQ9NPB6 346 aa7.84□□□□□ -1.15
SYNE1-205ENST00000367251 C5orf52A6NGY3 159 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 PATE4P0C8F1 98 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 NHLH1Q02575 133 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 NHLH2Q02577 135 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 ZNF154Q13106 437 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 RNF151Q2KHN1 245 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 PET117Q6UWS5 81 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 SLC35E3Q7Z769 313 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 WASHC3Q9Y3C0 194 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 SIP14410 1827 aa7.84□□□□□ -1.16
SYNE1-205ENST00000367251 IGKV3OR2-268A0A0C4DH90 116 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
SYNE1-205ENST00000367251 SPINK14Q6IE38 97 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 RAX2Q96IS3 184 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 NRIP2Q9BQI9 281 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 G6PC2Q9NQR9 355 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 CD8AP01732 235 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PGA5P0DJD9 388 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 KRTDAPP60985 99 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PIGYQ3MUY2 71 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 RIPPLY2Q5TAB7 128 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 DCAF12L2Q5VW00 463 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 SCGB1D4Q6XE38 83 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 Q8WTZ3 238 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-205ENST00000367251 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 WDR90Q96KV7 1748 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 IGHV3-43A0A0B4J1X8 118 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 H3BQ15 152 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 CXorf1O96002 111 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 OR5AL1P0C617 328 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 IGHV3-43DP0DP04 118 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 USF1P22415 310 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-205ENST00000367251 CEBPDP49716 269 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-205ENST00000367251 UCP3P55916 312 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 NRN1LQ496H8 165 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 NHLRC3Q5JS37 347 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 Q6ZN92 141 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 C5orf17Q8NAS9 161 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM37Q8WXS4 190 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 UCN2Q96RP3 112 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PKIBQ9C010 78 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PIPOXQ9P0Z9 390 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 C11orf94C9JXX5 98 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 FAM90A26D6RGX4 464 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 WNT5AP41221 380 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 HERVK_113P61574 105 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 OR10G8Q8NGN5 311 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 DDA1Q9BW61 102 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 TEX50A0A1B0GTY4 177 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM262E9PQX1 116 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 MPDU1O75352 247 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 MAGEA5P43359 124 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 MMDQ15546 238 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 DEFB121Q5J5C9 76 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 TSPO2Q5TGU0 170 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 MS4A10Q96PG2 267 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 RNF7Q9UBF6 113 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
SYNE1-205ENST00000367251 FCN1O00602 326 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 GYPAP02724 150 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 HSPB1P04792 205 aaKnown RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 MESP2Q0VG99 397 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 ZNF385AQ96PM9 386 aaKnown RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 J3QW42 95 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 SS18L1O75177 396 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 CCL2P13500 99 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 ATP6V0CP27449 155 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 HTR1DP28221 377 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 HOXA6P31267 233 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 HNRNPA3P51991 378 aaKnown RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 SPCS3P61009 180 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 C10orf128Q5T292 105 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 PMS2CLQ68D20 193 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 OR52M1Q8NGK5 317 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 OR1B1Q8NGR6 318 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 ZNF665Q9H7R5 613 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 A0A0J9YW62 118 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 MPTX1A8MV57 137 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 FAM78BQ5VT40 261 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 LINC00114Q6XXX2 140 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 DOLPP1Q86YN1 238 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 F5P12259 2224 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM14DPA8MWL7 114 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 M0QZK8 103 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 GGCTO75223 188 aaKnown RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 PRSS1P07477 247 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 HOXD4P09016 255 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-205ENST00000367251 CACNG7P62955 275 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms