RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 KLF3P57682 345 aaPredicted RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
SYNCRIP-201ENST00000355238 A0A1W2PPV9 198 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 TMEM210A6NLX4 147 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 C1QCP02747 245 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF841Q6ZN19 808 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A10PA6NDY2 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A18PA6NE21 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A16PA6NEW6 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A20PA6NIJ5 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A8PA6NJQ4 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A7PA6NKC0 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A22PA8MWA6 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A12PA8MX19 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A5PA8MXJ8 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A23PA8MXZ1 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A15PP0C7V4 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A13PP0C7W8 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A14PP0C7W9 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM90A24PP0C7X0 464 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 TWIST1Q15672 202 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 ONECUT1Q9UBC0 465 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 IL11RAQ14626 422 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 PRNTQ86SH4 94 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 SPSB4Q96A44 273 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 IL36RNQ9UBH0 155 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 CCL7P80098 99 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR51B2Q9Y5P1 312 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 NPTNQ9Y639 398 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 GABRG2P18507 467 aa11.05□□□□□ -0.64
SYNCRIP-201ENST00000355238 CDIPTO14735 213 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 MAS1LP35410 378 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 VEGFBP49765 207 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 HOXA4Q00056 320 aaPredicted RBP11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 C19orf48Q6RUI8 117 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR52M1Q8NGK5 317 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 SERGEFQ9UGK8 458 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 HIGD1AQ9Y241 93 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 EML2O95834 649 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 MMD2Q8IY49 270 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 SMIM8Q96KF7 97 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 ALKBH7Q9BT30 221 aaPredicted RBP11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 UBE2CO00762 179 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF708P17019 499 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 TGIF1Q15583 401 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF502Q8TBZ5 544 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 HARBI1Q96MB7 349 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 SELENOTP62341 195 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 TRA2AQ13595 282 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 HYPMO75409 117 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 MUC15Q8N387 334 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 MARS2Q96GW9 593 aaKnown RBP11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR2J1Q9GZK6 312 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM60AQ9NP50 221 aa11.04□□□□□ -0.64
SYNCRIP-201ENST00000355238 NHSQ6T4R5 1651 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 POU2F2P09086 479 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 GALNT14Q96FL9 552 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 MRPL13Q9BYD1 178 aaKnown RBP11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 CKS2P33552 79 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 FGF12P61328 243 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 C2orf68Q2NKX9 166 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 OR2Y1Q8NGV0 311 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 SDK1Q7Z5N4 2213 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 SCN7AQ01118 1682 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 CENPVL1A0A0U1RR11 272 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 MGPP08493 103 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF735P0CB33 412 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 FHITP49789 147 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 AMMECR1LQ6DCA0 310 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 CLDN16Q9Y5I7 305 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 A1L4Q6 167 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 ZNF83P51522 516 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 UCP3P55916 312 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 TRAV38-1A0A0B4J264 116 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 TMEM187Q14656 261 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
SYNCRIP-201ENST00000355238 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms