RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SNAPINO95295 136 aa8.31□□□□□ -1.08
GABPA-201ENST00000354828 CTRB1P17538 263 aa8.31□□□□□ -1.08
GABPA-201ENST00000354828 CTRB2Q6GPI1 263 aa8.31□□□□□ -1.08
GABPA-201ENST00000354828 FAM216BQ8N7L0 139 aa8.31□□□□□ -1.08
GABPA-201ENST00000354828 MRPL37Q9BZE1 423 aaKnown RBP8.31□□□□□ -1.08
GABPA-201ENST00000354828 NPAP1Q9NZP6 1156 aa8.31□□□□□ -1.08
GABPA-201ENST00000354828 FAM24AA6NFZ4 105 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 SLC25A17O43808 307 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 KLK2P20151 261 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 PTGDSP41222 190 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 NDUFA6P56556 154 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 DSCR9P59020 149 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 NRN1LQ496H8 165 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
GABPA-201ENST00000354828 TXN2Q99757 166 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 CHRDL1Q9BU40 450 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 SLC2A9Q9NRM0 540 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 NOTCH4Q99466 2003 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 FAM208BQ5VWN6 2430 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 DHRS7CA6NNS2 312 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 F5H697 171 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 SYNGR2O43760 224 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 ID1P41134 155 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 MMD2Q8IY49 270 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 SLC45A2Q9UMX9 530 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
GABPA-201ENST00000354828 C9orf170A2RU37 121 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 B3GALNT1O75752 331 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 HPRT1P00492 218 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 FCGR3AP08637 254 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 PSG2P11465 335 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 MST1P26927 711 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 CRYBA2P53672 197 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 SEZ6L2Q6UXD5 910 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 FAM219AQ8IW50 185 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 OR4C13Q8NGP0 309 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 OR10Z1Q8NGY1 313 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 C1orf196B1AJZ1 125 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 MT-ND4LP03901 98 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 TRAPPC2P0DI81 140 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 TRAPPC2BP0DI82 140 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 VSIG10L2P0DP72 767 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
GABPA-201ENST00000354828 SURF2Q15527 256 aaPredicted RBP8.3□□□□□ -1.08
GABPA-201ENST00000354828 CLEC12BQ2HXU8 276 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
GABPA-201ENST00000354828 WDFY1Q8IWB7 410 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 VSIG4Q9Y279 399 aa8.3□□□□□ -1.08
GABPA-201ENST00000354828 IGLV3-32A0A0A0MS00 114 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 EFNB2P52799 333 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 IGSF11Q5DX21 431 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 OR2T10Q8NGZ9 312 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 SH2D2AQ9NP31 389 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 DOPEY2Q9Y3R5 2298 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 IGKV1D-43A0A0B4J1Z2 117 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 TRIM77I1YAP6 450 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 SCTP09683 121 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 ZNF154Q13106 437 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 ZNF273Q14593 569 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 HCP5Q6MZN7 132 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 LILRB4Q8NHJ6 448 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
GABPA-201ENST00000354828 ABHD1Q96SE0 405 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 PRO3102Q9H379 93 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 BIN3Q9NQY0 253 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 MRPS18AQ9NVS2 196 aaKnown RBP8.29□□□□□ -1.08
GABPA-201ENST00000354828 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
GABPA-201ENST00000354828 ISG15P05161 165 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 NPBWR2P48146 333 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 UNQ9370/PRO34162Q6UXP9 181 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 TMEM186Q96B77 213 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 PRR13Q9NZ81 148 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 TICRRQ7Z2Z1 1910 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 CDRT15L2A8MXV6 281 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 MMP7P09237 267 aaPredicted RBP8.29□□□□□ -1.08
GABPA-201ENST00000354828 NPY1RP25929 384 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 RPS10P46783 165 aaKnown RBP8.29□□□□□ -1.08
GABPA-201ENST00000354828 UBE2V2Q15819 145 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 SAXO1Q8IYX7 474 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 RTN4RQ9BZR6 473 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 OR51I2Q9H344 312 aa8.29□□□□□ -1.08
GABPA-201ENST00000354828 IGHV1-18A0A0C4DH31 117 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A10PA6NDY2 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A18PA6NE21 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A16PA6NEW6 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A20PA6NIJ5 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A8PA6NJQ4 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 PCNX2A6NKB5 2137 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A7PA6NKC0 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 ZNF727A8MUV8 499 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A22PA8MWA6 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A12PA8MX19 464 aa8.28□□□□□ -1.08
GABPA-201ENST00000354828 FAM90A5PA8MXJ8 464 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms