RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 Q6ZR03 302 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 LDLRAD3Q86YD5 345 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 LGI3Q8N145 548 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 OR8H3Q8N146 312 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 BATF2Q8N1L9 274 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 OR10Z1Q8NGY1 313 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 STOML3Q8TAV4 291 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 NEK7Q8TDX7 302 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 C10orf105Q8TEF2 133 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 TOMM40LQ969M1 308 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 S100PBPQ96BU1 408 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 ZNF488Q96MN9 340 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 BARX1Q9HBU1 254 aaPredicted RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 TMEM165Q9HC07 324 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 ZFP57Q9NU63 452 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
CD44-205ENST00000352818 ELOVL5Q9NYP7 299 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 GLS2Q9UI32 602 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 WIPI2Q9Y4P8 454 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 COL7A1Q02388 2944 aa6.85□□□□□ -1.31
CD44-205ENST00000352818 IGLV3-9A0A075B6K5 115 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 IGKV1-6A0A0C4DH72 117 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C13orf42A0A1B0GVH6 325 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 H0YL77 283 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C16orf97H3BN30 126 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 IFNL4K9M1U5 179 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 GPR31O00270 319 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 MPPED1O15442 326 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 SCTP09683 121 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 OR5AC1P0C628 307 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 SLC25A16P16260 332 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 GLRXP35754 106 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 FXYD4P59646 89 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 HMGN3Q15651 99 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 LRRC37A5PQ49AS3 106 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 IGSF11Q5DX21 431 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 SLC35E4Q6ICL7 350 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 ACP7Q6ZNF0 438 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C11orf53Q8IXP5 236 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 H1FOOQ8IZA3 346 aaPredicted RBP6.84□□□□□ -1.31
CD44-205ENST00000352818 RDH5Q92781 318 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 IL22RA2Q969J5 263 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 MUCL1Q96DR8 90 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 ABHD14BQ96IU4 210 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 OR10C1Q96KK4 312 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 TMEM56Q96MV1 263 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 AQP10Q96PS8 301 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 ARPC5LQ9BPX5 153 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 RNF126Q9BV68 326 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C1QTNF6Q9BXI9 259 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 METTL8Q9H825 291 aaKnown RBP6.84□□□□□ -1.31
CD44-205ENST00000352818 FBXO9Q9UK97 447 aaPredicted RBP6.84□□□□□ -1.31
CD44-205ENST00000352818 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 TMEM56-RWDD3S4R434 201 aa6.84□□□□□ -1.31
CD44-205ENST00000352818 C3orf85A0A1B0GTC6 90 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 LEUTXA8MZ59 168 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 VWC2LB2RUY7 222 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 H0YIZ8 118 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
CD44-205ENST00000352818 CDIPTO14735 213 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 HAND1O96004 215 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 TGFAP01135 160 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 CRYAAP02489 173 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 RRASP10301 218 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 DUSP1P28562 367 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 S100GP29377 79 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 GNRHRP30968 328 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 NUP62P37198 522 aaPredicted RBP6.83□□□□□ -1.32
CD44-205ENST00000352818 ZNF83P51522 516 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 MSMO1Q15800 293 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 IAH1Q2TAA2 248 aaPredicted RBP6.83□□□□□ -1.32
CD44-205ENST00000352818 SMIM21Q3B7S5 101 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 PHLDA2Q53GA4 152 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 GGNBP1Q5YKI7 109 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 CLEC2AQ6UVW9 174 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 WDR82Q6UXN9 313 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 DTX2Q86UW9 622 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 NUP37Q8NFH4 326 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 OR5T2Q8NGG2 359 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 GLYATL2Q8WU03 294 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 ST8SIA2Q92186 375 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 DCUN1D4Q92564 292 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 MRPL24Q96A35 216 aaKnown RBP6.83□□□□□ -1.32
CD44-205ENST00000352818 TMEM222Q9H0R3 208 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 SLC25A32Q9H2D1 315 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 PRR13Q9NZ81 148 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 TAAR3PQ9P1P4 343 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 OR2W1Q9Y3N9 320 aa6.83□□□□□ -1.32
CD44-205ENST00000352818 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 IGHV4-61A0A0C4DH41 118 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 A0A1B0GW55 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 TMEM30CPA0ZSE6 113 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms