RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ALKBH7Q9BT30 221 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 PECRQ9BY49 303 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 TXNIPQ9H3M7 391 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 SAP30LQ9HAJ7 183 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM9BQ9NQ34 198 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 FSCN3Q9NQT6 498 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM106BQ9NUM4 274 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 GNG13Q9P2W3 67 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 PTRH2Q9Y3E5 179 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 PHF3Q92576 2039 aaKnown RBP6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 SEC16AO15027 2179 aa6.55□□□□□ -1.36
UBE2D3-204ENST00000349311 SDK1Q7Z5N4 2213 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 ADAMTS9Q9P2N4 1935 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 PIGBOS1A0A0B4J2F0 54 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 A0A1W2PR77 199 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 LMX1BO60663 402 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 KBTBD11O94819 623 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 CT62P0C5K7 136 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 TCN2P20062 427 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 MDKP21741 143 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 PEBP1P30086 187 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 NKX2-1P43699 371 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM50BP56557 158 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 PIGPP57054 158 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 DCAF7P61962 342 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 SSBP2P81877 361 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 FAM53BQ14153 422 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 SGCBQ16585 318 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 DEFB134Q4QY38 66 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM41BQ5BJD5 291 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 MARCH3Q86UD3 253 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 SLC22A18ASQ8N1D0 253 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 ZNF738Q8NE65 137 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 OR2V1Q8NHB1 315 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 CMTM2Q8TAZ6 248 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 DDIT4LQ96D03 193 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 SMIM7Q9BQ49 75 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 PSMG3Q9BT73 122 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 NECAP2Q9NVZ3 263 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 B3GAT1Q9P2W7 334 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 HSPB7Q9UBY9 170 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 TBC1D29Q9UFV1 150 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 ASXL3Q9C0F0 2248 aa6.54□□□□□ -1.36
UBE2D3-204ENST00000349311 KMT2EQ8IZD2 1858 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 FREM3P0C091 2139 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 OR6C6A6NF89 314 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 FAM166BA8MTA8 275 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 FOXI3A8MTJ6 420 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 CEBPZOSA8MTT3 80 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 F6UZH7 168 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM250H0YL14 139 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 WDR1O75083 606 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 VENTXO95231 258 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TTRP02766 147 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 OR5G3P0C626 314 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ESDP10768 282 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 CD99P14209 185 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 CXCL12P48061 93 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 DYNLT3P51808 116 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ERVS71-1P61550 626 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 KIR2DS3Q14952 304 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ACKR1Q16570 336 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 MPV17LQ2QL34 196 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 WDR25Q64LD2 544 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 OR5AS1Q8N127 324 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM252Q8N6L7 170 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 SLC38A9Q8NBW4 561 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 SCGB1C1Q8TD33 95 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 DOK4Q8TEW6 326 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 RNF133Q8WVZ7 376 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 RTN4IP1Q8WWV3 396 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 DAZLQ92904 295 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TSACCQ96A04 125 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ADAT3Q96EY9 351 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 SDSLQ96GA7 329 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 C1orf147Q96MC9 270 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 GPER1Q99527 375 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ELOVL1Q9BW60 279 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TM2D1Q9BX74 207 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 VN1R1Q9GZP7 353 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 PBOV1Q9GZY1 135 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 MAGT1Q9H0U3 335 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 BANF2Q9H503 90 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 GLRX2Q9NS18 164 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 FAM206AQ9NX38 181 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 WIPI2Q9Y4P8 454 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 COL5A1P20908 1838 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-204ENST00000349311 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-204ENST00000349311 TRAV30A0A087WSZ9 112 aa6.52□□□□□ -1.37
UBE2D3-204ENST00000349311 ZFP92A6NM28 416 aa6.52□□□□□ -1.37
UBE2D3-204ENST00000349311 RNF212BA8MTL3 300 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms