RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 LMO1P25800 156 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 PSG4Q00888 419 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 Q5PR19 223 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 C1orf194Q5T5A4 169 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 FAM27BQ5VT28 67 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 SEM1Q6ZVN7 128 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 S100A7AQ86SG5 101 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 OR5D18Q8NGL1 313 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 EHFQ9NZC4 300 aa12.9□□□□□ -0.34
BRAT1-201ENST00000340611 TAAR5O14804 337 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 LYZL6O75951 148 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 CCNOP22674 350 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 GABRR1P24046 479 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 FPR2P25090 351 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 CADP27708 2225 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 ACSF3Q4G176 576 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 FAM180AQ6UWF9 173 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 CSNK2A3Q8NEV1 391 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 FKBP11Q9NYL4 201 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 RAC2P15153 192 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 PRSS8Q16651 343 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF66Q6ZN08 573 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 FOXL2NBQ6ZUU3 175 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 GJC3Q8NFK1 279 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 OR2AE1Q8NHA4 323 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 SNRNP40Q96DI7 357 aaKnown RBP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 TVP23CQ96ET8 276 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 FAM71F1Q96KD3 344 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-201ENST00000340611 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF20P17024 532 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 RND3P61587 244 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 IL15RAQ13261 267 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 VAX1Q5SQQ9 334 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 TBX15Q96SF7 602 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 CABLES2Q9BTV7 478 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
BRAT1-201ENST00000340611 PTGER4P35408 488 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 GPER1Q99527 375 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 TMEM59Q9BXS4 323 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 TUBG2Q9NRH3 451 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 DIDO1Q9BTC0 2240 aaKnown RBP12.88□□□□□ -0.35
BRAT1-201ENST00000340611 ICE1Q9Y2F5 2266 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 FAM221AA4D161 298 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 KIR2DL2P43627 348 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-201ENST00000340611 SNU13P55769 128 aaKnown RBP12.88□□□□□ -0.35
BRAT1-201ENST00000340611 FAM3AP98173 230 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 ABHD12BQ7Z5M8 362 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-201ENST00000340611 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 RNF150Q9ULK6 438 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 FAM215AQ9Y5M1 114 aa12.88□□□□□ -0.35
BRAT1-201ENST00000340611 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 LY6DQ14210 128 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 RIPPLY2Q5TAB7 128 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-201ENST00000340611 WFDC1Q9HC57 220 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 CIDEAO60543 219 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 CHRM2P08172 466 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 CD55P08174 381 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
BRAT1-201ENST00000340611 C1orf147Q96MC9 270 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-201ENST00000340611 GPR84Q9NQS5 396 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 MEMO1Q9Y316 297 aa12.87□□□□□ -0.35
BRAT1-201ENST00000340611 CHTOPQ9Y3Y2 248 aaKnown RBP12.87□□□□□ -0.35
BRAT1-201ENST00000340611 XRCC2O43543 280 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 RBMXP38159 391 aaKnown RBP12.86□□□□□ -0.35
BRAT1-201ENST00000340611 FAM214BQ7L5A3 538 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 OR5AS1Q8N127 324 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 GMPPAQ96IJ6 420 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-201ENST00000340611 OR2H1Q9GZK4 316 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 OSGIN2Q9Y236 505 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 ROS1P08922 2347 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 HEATR1Q9H583 2144 aaKnown RBP12.86□□□□□ -0.35
BRAT1-201ENST00000340611 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 M0R135 149 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF205O95201 554 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-201ENST00000340611 IL22RA2Q969J5 263 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 MRPL24Q96A35 216 aaKnown RBP12.86□□□□□ -0.35
BRAT1-201ENST00000340611 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 ZNF799Q96GE5 643 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 POLEQ07864 2286 aa12.86□□□□□ -0.35
BRAT1-201ENST00000340611 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 SYNGR3O43761 229 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
BRAT1-201ENST00000340611 GLI4P10075 376 aa12.85□□□□□ -0.35
BRAT1-201ENST00000340611 COL5A1-AS1Q5SY13 56 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms