RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SELLP14151 372 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 TNFSF4P23510 183 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 NCMAPQ5T1S8 102 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 RFESDQ8TAC1 157 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 RNF7Q9UBF6 113 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 NUP50Q9UKX7 468 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 RCL1Q9Y2P8 373 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 HBZP02008 142 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 OR8U9P0C7N5 309 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 FAM157CP0CG43 387 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 SSX8Q7RTT4 187 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 STPG2Q8N412 459 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 OR52L2PQ8NGH6 319 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 OR8U1Q8NH10 309 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 PPP1R3CQ9UQK1 317 aa18.75■□□□□ 0.59
PDLIM2-202ENST00000308354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 E7EQL1 145 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 H0Y980 276 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 ADAM20O43506 726 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 IL2RGP31785 369 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 GNMTQ14749 295 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 DUX4L9Q6RFH8 374 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 DMBX1Q8NFW5 382 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 OR51H1Q8NH63 302 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 GALMQ96C23 342 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 ZFP57Q9NU63 452 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 POMT1Q9Y6A1 747 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 OOEPA6NGQ2 149 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 C17orf100A8MU93 164 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 PLAUP00749 431 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 IGLV2-14P01704 120 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 F2RP25116 425 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 TLE1Q04724 770 aa18.74■□□□□ 0.59
PDLIM2-202ENST00000308354 FAM90A1Q86YD7 464 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 OR5D13Q8NGL4 314 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 RNASE6Q93091 150 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 KCNS2Q9ULS6 477 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 IGHV3-43A0A0B4J1X8 118 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 IGHV3-43DP0DP04 118 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 EIF5AP63241 154 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 NMSQ5H8A3 153 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 CA5BP1Q8WTZ4 195 aa18.73■□□□□ 0.59
PDLIM2-202ENST00000308354 ZNF705EA8MWA4 302 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 GAPDHP04406 335 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 S100GP29377 79 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 P2RY1P47900 373 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 LTC4SQ16873 150 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 ARL11Q969Q4 196 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 NDRG3Q9UGV2 375 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 RNF150Q9ULK6 438 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 DSCAMO60469 2012 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 GPR137BO60478 399 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 FBXO24O75426 580 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 JTBO76095 146 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 VDAC1P21796 283 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 NKX2-1P43699 371 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 MARC2Q969Z3 335 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 SPIN2AQ99865 258 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 SPIN2BQ9BPZ2 258 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 LPAR3Q9UBY5 353 aa18.72■□□□□ 0.59
PDLIM2-202ENST00000308354 DYSFO75923 2080 aa18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 ANKHD1Q8IWZ3 2542 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 SFTPCP11686 197 aa18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 PPP1CCP36873 323 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 EDDM3BP56851 147 aa18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 POLR2GP62487 172 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 FBXL19-AS1Q494R0 122 aa18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 SNX22Q96L94 193 aa18.71■□□□□ 0.59
PDLIM2-202ENST00000308354 DUXBA0A1W2PPF3 345 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 CXorf66Q5JRM2 361 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 GPR157Q5UAW9 335 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 MAGT1Q9H0U3 335 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 WFDC1Q9HC57 220 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 DEFB108AA8MXU0 73 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 K7N7A8 449 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 SIGLEC5O15389 551 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 GYPAP02724 150 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 CD3EP07766 207 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 NHLH2Q02577 135 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 EIF5AL1Q6IS14 154 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 BPIFCQ8NFQ6 507 aa18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 MS4A7Q9GZW8 240 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-202ENST00000308354 ODAMA1E959 279 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 MGST3O14880 152 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SIAH2O43255 324 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 IRF2P14316 349 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 FAM209AQ5JX71 171 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SUN5Q8TC36 379 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 FAM222BQ8WU58 562 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 IL22RA2Q969J5 263 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 CCL13Q99616 98 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 C11orf1Q9H5F2 150 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 USF3Q68DE3 2245 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 CLEC18AA5D8T8 446 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SSSCA1O60232 199 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 NXPH3O95157 252 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SERPINE2P07093 398 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 TNFRSF1AP19438 455 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 MST1LQ2TV78 715 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms