RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FBXL17Q9UF56 701 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 KIAA2026Q5HYC2 2103 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 PIEZO2Q9H5I5 2752 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DCHS1Q96JQ0 3298 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 LAMA5O15230 3695 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 CEP295Q9C0D2 2601 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 A0A0G2JRQ6 117 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 C17orf100A8MU93 164 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 PITX3O75364 302 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 JTBO76095 146 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 FAM157CP0CG43 387 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF16P17020 682 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 EIF4EBP1Q13541 118 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 CLEC9AQ6UXN8 241 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 HSD17B13Q7Z5P4 300 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 EIF4E3Q8N5X7 224 aaKnown RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 C5orf30Q96GV9 206 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 OR2D2Q9H210 308 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 LIN7CQ9NUP9 197 aaKnown RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 IGHV3-43A0A0B4J1X8 118 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
TRIM55-201ENST00000276573 SHISA9B4DS77 424 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 TEX46H3BTG2 121 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 CCL21O00585 134 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 FGF2P09038 288 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 CGB3P0DN86 165 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 CGB7P0DN87 165 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 IGHV3-43DP0DP04 118 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 MMP9P14780 707 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 TNFRSF1AP19438 455 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 PVALBP20472 110 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-201ENST00000276573 LPAR6P43657 344 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 CCL8P80075 99 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 NHLH2Q02577 135 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 STUMQ69YW2 141 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 ADAM5Q6NVV9 412 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 Q6ZRM9 215 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF561Q8N587 486 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 OR2C3Q8N628 320 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 DEFB108BQ8NET1 73 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 RNF141Q8WVD5 230 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 ESRP2Q9H6T0 727 aaKnown RBP7.98□□□□□ -1.13
TRIM55-201ENST00000276573 WFDC1Q9HC57 220 aa7.98□□□□□ -1.13
TRIM55-201ENST00000276573 FAM24AA6NFZ4 105 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 A8MXK9 166 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 DEFB108AA8MXU0 73 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 E7EQL1 145 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 CHST1O43916 411 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 IGKV1-5P01602 117 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 IRF2P14316 349 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 MUC1P15941 1255 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 EDDM3BP56851 147 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 RPL30P62888 115 aaKnown RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 FBXL19-AS1Q494R0 122 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 MORN2Q502X0 79 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 TEX36Q5VZQ5 186 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 EIF5AL1Q6IS14 154 aaKnown RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF788Q6ZQV5 615 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 TGIF2LYQ8IUE0 185 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ZCCHC24Q8N2G6 241 aaKnown RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 UBAC2Q8NBM4 344 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 C14orf79Q96F83 325 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ARV1Q9H2C2 271 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 OR6C3Q9NZP0 311 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ATMQ13315 3056 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 F2RL2O00254 374 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 SHOXO15266 292 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 SSSCA1O60232 199 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 YPEL1O60688 119 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 GYPAP02724 150 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 SELLP14151 372 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 EPHA1P21709 976 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 CHRNB4P30926 498 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 PAX9P55771 341 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 VAMP2P63027 116 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 EWSR1Q01844 656 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 LTC4SQ16873 150 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 IZUMO4Q1ZYL8 232 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 FGFRL1Q8N441 504 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF808Q8N4W9 903 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 RNASE11Q8TAA1 199 aaKnown RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 RNASE6Q93091 150 aaKnown RBP7.97□□□□□ -1.13
TRIM55-201ENST00000276573 GAFA1Q96PS6 74 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 YPEL2Q96QA6 119 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 CCL13Q99616 98 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 AGMATQ9BSE5 352 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 EGLN1Q9GZT9 426 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 SLC25A31Q9H0C2 315 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 DCAF16Q9NXF7 216 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 JPT1Q9UK76 154 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 PSG11Q9UQ72 335 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms