RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CRIM1Q9NZV1 1036 aa16.11■□□□□ 0.17
SNX4-201ENST00000251775 DNAJC13O75165 2243 aa16.11■□□□□ 0.17
SNX4-201ENST00000251775 KIAA1324LA8MWY0 1029 aaPredicted RBP16.1■□□□□ 0.17
SNX4-201ENST00000251775 CCL2P13500 99 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 GZMHP20718 246 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 SLC10A1Q14973 349 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 RNPS1Q15287 305 aaKnown RBP16.1■□□□□ 0.17
SNX4-201ENST00000251775 NRN1LQ496H8 165 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 Q6ZS49 121 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 LINC00470Q9BZP3 86 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 LAMP3Q9UQV4 416 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 LNP1A1A4G5 178 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 CCNOP22674 350 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 NECAP1Q8NC96 275 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 RBKSQ9H477 322 aa16.1■□□□□ 0.17
SNX4-201ENST00000251775 ZNF503-AS2A6NEH8 195 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 TUSC2O75896 110 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 MAGEA5P43359 124 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 ADIRFQ15847 76 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 OR56B2PQ8NGI1 322 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 SCGB1C1Q8TD33 95 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 IL22RA2Q969J5 263 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 TECTBQ96PL2 329 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 FGF23Q9GZV9 251 aaPredicted RBP16.09■□□□□ 0.17
SNX4-201ENST00000251775 CHD3Q12873 2000 aaKnown RBP16.09■□□□□ 0.17
SNX4-201ENST00000251775 H0Y980 276 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 PDLIM4P50479 330 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 OR1C1Q15619 314 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 NCR3LG1Q68D85 454 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 PRRG4Q9BZD6 226 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 NAT8Q9UHE5 227 aa16.09■□□□□ 0.17
SNX4-201ENST00000251775 GPR179Q6PRD1 2367 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 CASP6P55212 293 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 ERVS71-1P61550 626 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 ARL16Q0P5N6 197 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 ZNF66Q6ZN08 573 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 OR51G1Q8NGK1 321 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 GPR146Q96CH1 333 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 SMIM7Q9BQ49 75 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 ATG101Q9BSB4 218 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 TTTY12Q9BZ98 90 aa16.08■□□□□ 0.17
SNX4-201ENST00000251775 TUBG1P23258 451 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 MDH2P40926 338 aaKnown RBP16.08■□□□□ 0.16
SNX4-201ENST00000251775 LINC00696Q6ZRV3 163 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 CYP2G1PQ6ZSU1 146 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 TGIF2LYQ8IUE0 185 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 TMEM68Q96MH6 324 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 PSMG3Q9BT73 122 aaPredicted RBP16.08■□□□□ 0.16
SNX4-201ENST00000251775 REPIN1Q9BWE0 567 aaKnown RBP16.08■□□□□ 0.16
SNX4-201ENST00000251775 B4GALT7Q9UBV7 327 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 PRSS50Q9UI38 385 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 KIAA2026Q5HYC2 2103 aa16.08■□□□□ 0.16
SNX4-201ENST00000251775 IGKV1-6A0A0C4DH72 117 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 PGLYRP1O75594 196 aaPredicted RBP16.07■□□□□ 0.16
SNX4-201ENST00000251775 NAPSAO96009 420 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 IZUMO4Q1ZYL8 232 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 ACSF3Q4G176 576 aaPredicted RBP16.07■□□□□ 0.16
SNX4-201ENST00000251775 ZNF525Q8N782 197 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 RAB40CQ96S21 281 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 AGMATQ9BSE5 352 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 RNF150Q9ULK6 438 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 KNTC1P50748 2209 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 C5orf49A4QMS7 147 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 NUBP1P53384 320 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 DCAF10Q5QP82 559 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 TMEM251Q8N6I4 163 aa16.07■□□□□ 0.16
SNX4-201ENST00000251775 DOCK7Q96N67 2140 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 MAP1LC3B2A6NCE7 125 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 PPP5D1E7EU14 171 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 SYNGR4O95473 234 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 GALR1P47211 349 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 TNFRSF9Q07011 255 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 PRDX4Q13162 271 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 TMEM241Q24JQ0 296 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 CENPVQ7Z7K6 275 aaPredicted RBP16.06■□□□□ 0.16
SNX4-201ENST00000251775 TMEM170AQ8WVE7 144 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 ACY3Q96HD9 319 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 HS3ST6Q96QI5 342 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 MAP1LC3BQ9GZQ8 125 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 ARHGAP21Q5T5U3 1957 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 OR4A8P0C604 315 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 METTL15P1P0C7V9 234 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 BCL3P20749 454 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 SRSF7Q16629 238 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX4-201ENST00000251775 BSXQ3C1V8 233 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 Q6ZRM9 215 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 HAPLN4Q86UW8 402 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 Q8NFD4 153 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 ELOVL1Q9BW60 279 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 SNHG12Q9BXW3 62 aa16.06■□□□□ 0.16
SNX4-201ENST00000251775 TNRC6AQ8NDV7 1962 aaKnown RBP16.05■□□□□ 0.16
SNX4-201ENST00000251775 A0A1B0GWJ7 208 aa16.05■□□□□ 0.16
SNX4-201ENST00000251775 ZNF737O75373 536 aa16.05■□□□□ 0.16
SNX4-201ENST00000251775 CD59P13987 128 aa16.05■□□□□ 0.16
SNX4-201ENST00000251775 F2RP25116 425 aa16.05■□□□□ 0.16
SNX4-201ENST00000251775 RPL23P62829 140 aaKnown RBP16.05■□□□□ 0.16
SNX4-201ENST00000251775 C3AR1Q16581 482 aa16.05■□□□□ 0.16
SNX4-201ENST00000251775 PCGF1Q9BSM1 259 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms