RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ZDHHC11Q9H8X9 412 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 SLC7A10Q9NS82 523 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 PITPNC1Q9UKF7 332 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 CFAP46Q8IYW2 2715 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 TRBV6-6A0A0A6YYG2 114 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 TGIF2-C20orf24A0A0A6YYL0 155 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 KIR2DS1A0A191URI9 304 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 TRGC2P03986 189 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 BCL2P10415 239 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 EPHA1P21709 976 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 CD200P41217 278 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 KIR2DS4P43632 304 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 KIR2DS1Q14954 304 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 SLC10A1Q14973 349 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 NRN1LQ496H8 165 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 CXorf66Q5JRM2 361 aaPredicted RBP17.49■□□□□ 0.39
SNX3-201ENST00000230085 OR2AE1Q8NHA4 323 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 ABHD5Q8WTS1 349 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 CALHM2Q9HA72 323 aa17.49■□□□□ 0.39
SNX3-201ENST00000230085 CYB5BO43169 146 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 ZIC3O60481 467 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 FOSL1P15407 271 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 PCBD1P61457 104 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 YRDCQ86U90 279 aaKnown RBP17.48■□□□□ 0.39
SNX3-201ENST00000230085 STX12Q86Y82 276 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 DYRK2Q92630 601 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 RIMS4Q9H426 269 aaPredicted RBP17.48■□□□□ 0.39
SNX3-201ENST00000230085 SDF2L1Q9HCN8 221 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 DVL1O14640 695 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 TRGC1P0CF51 173 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 SERF2P84101 59 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 ZNF92Q03936 586 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 MPV17LQ2QL34 196 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 CENPVQ7Z7K6 275 aaPredicted RBP17.48■□□□□ 0.39
SNX3-201ENST00000230085 GPR61Q9BZJ8 451 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 ZNF442Q9H7R0 627 aa17.48■□□□□ 0.39
SNX3-201ENST00000230085 LRP5LA4QPB2 252 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 SLC22A20A6NK97 555 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 KIAA1324LA8MWY0 1029 aaPredicted RBP17.47■□□□□ 0.39
SNX3-201ENST00000230085 TSTD3H0UI37 97 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 ZNF205O95201 554 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 LCATP04180 440 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 SRD5A2P31213 254 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 ASCL1P50553 236 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 RAC3P60763 192 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 WIPI1Q5MNZ9 446 aaPredicted RBP17.47■□□□□ 0.39
SNX3-201ENST00000230085 OR2T2Q6IF00 324 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 ZNF818PQ6ZRF7 136 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 ZNF845Q96IR2 970 aaPredicted RBP17.47■□□□□ 0.39
SNX3-201ENST00000230085 PRDM14Q9GZV8 571 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 TAAR3PQ9P1P4 343 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 ZGRF1Q86YA3 2104 aa17.47■□□□□ 0.39
SNX3-201ENST00000230085 NBASA2RRP1 2371 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 ZNHIT1O43257 154 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 TDGF1P3P51864 188 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 ABLIM2Q6H8Q1 611 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 ZNF774Q6NX45 483 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 COLCA1Q6ZS62 124 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 LINC00596Q86U02 117 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 TGIF2LYQ8IUE0 185 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 CA5BP1Q8WTZ4 195 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 FRZBQ92765 325 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 UCN2Q96RP3 112 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 RFNGQ9Y644 331 aa17.46■□□□□ 0.39
SNX3-201ENST00000230085 A0A1B0GV50 99 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 CHST1O43916 411 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 IFNA5P01569 189 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 GLI4P10075 376 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 DDTP30046 118 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 LSM10Q969L4 123 aaKnown RBP17.45■□□□□ 0.38
SNX3-201ENST00000230085 C1QTNF5Q9BXJ0 243 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 OR2H1Q9GZK4 316 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 ATP23Q9Y6H3 246 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 GTF3C1Q12789 2109 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 FAM221AA4D161 298 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 NPIPB11E5RHQ5 1161 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 ZNF32P17041 273 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 FGF12P61328 243 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 CDPF1Q6NVV7 123 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 TMEM183AQ8IXX5 376 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 ZNF295-AS1Q8N0V1 137 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 GAPTQ8N292 157 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 ZNF837Q96EG3 531 aaPredicted RBP17.45■□□□□ 0.38
SNX3-201ENST00000230085 SRD5A3Q9H8P0 318 aa17.45■□□□□ 0.38
SNX3-201ENST00000230085 MRPS18CQ9Y3D5 142 aaKnown RBP17.45■□□□□ 0.38
SNX3-201ENST00000230085 RP1L1Q8IWN7 2480 aaPredicted RBP17.44■□□□□ 0.38
SNX3-201ENST00000230085 A0A0J9YW62 118 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 CST7O76096 145 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 IGHG3P01860 377 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 OMGP23515 440 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 TLE1Q04724 770 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 JOSD1Q15040 202 aaPredicted RBP17.44■□□□□ 0.38
SNX3-201ENST00000230085 KRTCAP3Q53RY4 240 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 MRGPRGQ86SM5 289 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 ZNF611Q8N823 705 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 PINX1Q96BK5 328 aaKnown RBP17.44■□□□□ 0.38
SNX3-201ENST00000230085 C2orf88Q9BSF0 95 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 ACTR3CQ9C0K3 210 aaPredicted RBP17.44■□□□□ 0.38
SNX3-201ENST00000230085 WNT5BQ9H1J7 359 aa17.44■□□□□ 0.38
SNX3-201ENST00000230085 TRGV5A0A0B4J1U4 118 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms