RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 LURAP1LQ8IV03 231 aa12.07□□□□□ -0.48
PRKAB1-201ENST00000229328 RFESDQ8TAC1 157 aa12.07□□□□□ -0.48
PRKAB1-201ENST00000229328 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
PRKAB1-201ENST00000229328 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
PRKAB1-201ENST00000229328 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
PRKAB1-201ENST00000229328 PCNX1Q96RV3 2341 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNF705EA8MWA4 302 aaPredicted RBP12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 JTBO76095 146 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 TMEM50AO95807 157 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 ID3Q02535 119 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 EDDM3AQ14507 147 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNF585BQ52M93 769 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 Q6ZRM9 215 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 C16orf97H3BN30 126 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 LPAR3Q9UBY5 353 aa12.06□□□□□ -0.48
PRKAB1-201ENST00000229328 WNT2P09544 360 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 CFHR2P36980 270 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 EWSR1Q01844 656 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 WFDC8Q8IUA0 241 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 OR2C3Q8N628 320 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 LHBP01229 141 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 IGKV1-5P01602 117 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 THBDP07204 575 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 CAV2P51636 162 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 ODF3L1Q8IXM7 274 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 BPIFCQ8NFQ6 507 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 ARL11Q969Q4 196 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 OR2D2Q9H210 308 aa12.05□□□□□ -0.48
PRKAB1-201ENST00000229328 KALRNO60229 2985 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 PITX3O75364 302 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 LPAR6P43657 344 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 AKR1C2P52895 323 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNRF1Q8ND25 227 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ARV1Q9H2C2 271 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ZZEF1O43149 2961 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 DPRXA6NFQ7 191 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 DEFB108AA8MXU0 73 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 C15orf65H3BRN8 121 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ATXN7O15265 892 aaPredicted RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 CHST1O43916 411 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 IGHV1-46P01743 117 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 OMGP23515 440 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 CD80P33681 288 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 RPL30P62888 115 aaKnown RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 LURAP1Q96LR2 239 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
PRKAB1-201ENST00000229328 MED6O75586 246 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 ID4P47928 161 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 LTC4SQ16873 150 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 PLEKHF2Q9H8W4 249 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 LIN7CQ9NUP9 197 aaKnown RBP12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 ABCD4O14678 606 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 SELLP14151 372 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 SULT1A2P50226 295 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 PAX9P55771 341 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 OR2B11Q5JQS5 317 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 TMEM108Q6UXF1 575 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 ZNF295-AS1Q8N0V1 137 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 RNASE11Q8TAA1 199 aaKnown RBP12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 GCM1Q9NP62 436 aa12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 LYRM2Q9NU23 88 aaPredicted RBP12.03□□□□□ -0.48
PRKAB1-201ENST00000229328 A0A1B0GU03 582 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 RAMP3O60896 148 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 LINC00205P59089 165 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 TNFAIP6P98066 277 aaPredicted RBP12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 PAX5Q02548 391 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 EIF4EBP1Q13541 118 aaPredicted RBP12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 CLINT1Q14677 625 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 DUX4L9Q6RFH8 374 aaPredicted RBP12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 NINJ1Q92982 152 aa12.02□□□□□ -0.49
PRKAB1-201ENST00000229328 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms