RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 H3BML4 177 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 SCGB1A1P11684 91 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 DNASE1L1P49184 302 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-201ENST00000220429 PNKDQ8N490 385 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 PSMF1Q92530 271 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 ZNF665Q9H7R5 613 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 MED29Q9NX70 200 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
GABPB1-201ENST00000220429 NPIPA5E9PKD4 350 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 ZFAND5O76080 213 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 PPIAL4GP0DN37 164 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 AMY2BP19961 511 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 ANOS1P23352 680 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 IL3RAP26951 378 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 PRRX1P54821 245 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
GABPB1-201ENST00000220429 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
GABPB1-201ENST00000220429 KCTD18Q6PI47 426 aaPredicted RBP11.68□□□□□ -0.54
GABPB1-201ENST00000220429 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
GABPB1-201ENST00000220429 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 AGMATQ9BSE5 352 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 G6PC2Q9NQR9 355 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 FBXL7Q9UJT9 491 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 NPIPA1Q9UND3 350 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 G3V3Y1 287 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 PITX3O75364 302 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 SERF1AO75920 110 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 LINC00310P59036 64 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 OR52N5Q8NH56 324 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 NAT6Q93015 286 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 DDIT4LQ96D03 193 aa11.68□□□□□ -0.54
GABPB1-201ENST00000220429 LRRC3CA6NJW4 275 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 CFIP05156 583 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 CD99P14209 185 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 CTSSP25774 331 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 DAP3P51398 398 aaKnown RBP11.67□□□□□ -0.54
GABPB1-201ENST00000220429 SELENOVP59797 346 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 SRPXP78539 464 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 PLPPR5Q32ZL2 321 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 DNM1P34Q6PK57 102 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 ATP6V0BQ99437 205 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 RHBDD3Q9Y3P4 386 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 ZDBF2Q9HCK1 2354 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 CEBPZOSA8MTT3 80 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 PROB1E7EW31 1015 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 SRSF10O75494 262 aaKnown RBP11.67□□□□□ -0.54
GABPB1-201ENST00000220429 VSIG8P0DPA2 414 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 RUNX1Q01196 453 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 GNMTQ14749 295 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 WDR5BQ86VZ2 330 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 LYPD6Q86Y78 171 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 OR2C3Q8N628 320 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 OR1N2Q8NGR9 330 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 METTL7AQ9H8H3 244 aa11.67□□□□□ -0.54
GABPB1-201ENST00000220429 IGLV3-32A0A0A0MS00 114 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 NPIPB13A6NJU9 1138 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 NPIPB4C9JG80 1138 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 TAX1BP3O14907 124 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ADMP35318 185 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ZNF93P35789 620 aaPredicted RBP11.66□□□□□ -0.54
GABPB1-201ENST00000220429 QRFPP83859 136 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 PSG3Q16557 428 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SLC25A53Q5H9E4 307 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SULF2Q8IWU5 870 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 LGI3Q8N145 548 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 GUCD1Q96NT3 240 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ATP5SQ99766 215 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 NUDT16L1Q9BRJ7 211 aaKnown RBP11.66□□□□□ -0.54
GABPB1-201ENST00000220429 C19orf25Q9UFG5 118 aaPredicted RBP11.66□□□□□ -0.54
GABPB1-201ENST00000220429 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 B3GALT1Q9Y5Z6 326 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 PATE3B3GLJ2 98 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 CDIPTO14735 213 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 SH2D1BO14796 132 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 RAMP3O60896 148 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 DKK1O94907 266 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 HPNP05981 417 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 ZNF823P16415 610 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 AADACP22760 399 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 OMGP23515 440 aa11.66□□□□□ -0.54
GABPB1-201ENST00000220429 CRYBA4P53673 196 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms