RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FAM106AQ4KMX7 169 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 ABHD14BQ96IU4 210 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 SCNM1Q9BWG6 230 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 ZNF735P0CB33 412 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 OR10J6PQ8NGY7 276 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 LINC01560Q8TB33 94 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 C16orf92Q96LL3 132 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 PARD6AQ9NPB6 346 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 DCAF16Q9NXF7 216 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 IGHV1-69-2A0A0G2JMI3 117 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 A1L4Q6 167 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 RGS13O14921 159 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 ZNHIT1O43257 154 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 CRISP2P16562 243 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 KLF14Q8TD94 323 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-201ENST00000219334 PKIBQ9C010 78 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 IDI2-AS1Q9NZ38 188 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 VAX2Q9UIW0 290 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 SMAD7O15105 426 aaKnown RBP16.37■□□□□ 0.21
SMPD3-201ENST00000219334 LY6EQ16553 131 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 SLC25A53Q5H9E4 307 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 MRPL37Q9BZE1 423 aaKnown RBP16.37■□□□□ 0.21
SMPD3-201ENST00000219334 ST6GALNAC2Q9UJ37 374 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 CDRT15L2A8MXV6 281 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 RPL8P62917 257 aaKnown RBP16.37■□□□□ 0.21
SMPD3-201ENST00000219334 CHAC2Q8WUX2 184 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 DDB2Q92466 427 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 CEACAM18A8MTB9 384 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 RHBDL1O75783 438 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-201ENST00000219334 TMEM78Q5T7P6 136 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 PAXXQ9BUH6 204 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 SIRT7Q9NRC8 400 aa16.37■□□□□ 0.21
SMPD3-201ENST00000219334 ODAMA1E959 279 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 WNT9BO14905 357 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 COX5BP10606 129 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 NANOS3P60323 173 aaKnown RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 Q6ZN92 141 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 GTF2H5Q6ZYL4 71 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 ANAPC16Q96DE5 110 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 DCTN5Q9BTE1 182 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 NPVFQ9HCQ7 196 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 SRSF10O75494 262 aaKnown RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 OR2T10Q8NGZ9 312 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 COL4A5P29400 1685 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 PDE6DO43924 150 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 TMEM255AQ5JRV8 349 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 C8orf82Q6P1X6 216 aaPredicted RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 TIMP4Q99727 224 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 CALYQ9NYX4 217 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 PAGE4O60829 102 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 GZMMP51124 257 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 IQCJQ1A5X6 159 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 TCTEX1D1Q8N7M0 179 aa16.36■□□□□ 0.21
SMPD3-201ENST00000219334 GPX7Q96SL4 187 aaPredicted RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 NXF2Q9GZY0 626 aaKnown RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 MRPS18AQ9NVS2 196 aaKnown RBP16.36■□□□□ 0.21
SMPD3-201ENST00000219334 EFNB2P52799 333 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 EAF1Q96JC9 268 aaPredicted RBP16.35■□□□□ 0.21
SMPD3-201ENST00000219334 RHOVQ96L33 236 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 LIPFP07098 398 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 ZP3P21754 424 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 DCAF12L2Q5VW00 463 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 SCARF2Q96GP6 870 aaPredicted RBP16.35■□□□□ 0.21
SMPD3-201ENST00000219334 TMSB15BA0A087X1C1 80 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 CTXND1A0A1B0GTU2 59 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A10PA6NDY2 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A18PA6NE21 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A16PA6NEW6 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A20PA6NIJ5 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A8PA6NJQ4 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A7PA6NKC0 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A22PA8MWA6 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A12PA8MX19 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A5PA8MXJ8 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A23PA8MXZ1 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A15PP0C7V4 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A13PP0C7W8 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A14PP0C7W9 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM90A24PP0C7X0 464 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 CLRN3Q8NCR9 226 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 ADAD2Q8NCV1 583 aaKnown RBP16.35■□□□□ 0.21
SMPD3-201ENST00000219334 AP5S1Q9NUS5 200 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 hCG_38984A0A1B0GV85 526 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 PF4P02776 101 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FSTP19883 344 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 CD1BP29016 333 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 TMEM91Q6ZNR0 172 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 HCP5Q6MZN7 132 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 FAM24BQ8N5W8 94 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 SLC25A33Q9BSK2 321 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 TOLLIPQ9H0E2 274 aa16.35■□□□□ 0.21
SMPD3-201ENST00000219334 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
SMPD3-201ENST00000219334 CD1AP06126 327 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 PGA5P0DJD9 388 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 CENPVQ7Z7K6 275 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-201ENST00000219334 GBGT1Q8N5D6 347 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
SMPD3-201ENST00000219334 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms