RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KDM3BQ7LBC6 1761 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 CEACAM18A8MTB9 384 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 EPHA8P29322 1005 aaPredicted RBP12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 FAM216AQ8WUB2 273 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 MRPL18Q9H0U6 180 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 CRYBB2P43320 205 aa12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 MRPL30Q8TCC3 161 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-201ENST00000216484 GREB1Q4ZG55 1949 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 ID4P47928 161 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 SKP2Q13309 424 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 MOGAT3Q86VF5 341 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 CYB561D1Q8N8Q1 229 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 MRGPRX1Q96LB2 322 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 LINC00862A6NCI5 91 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 CKS1BP61024 79 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 CX3CL1P78423 397 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 HIST1H1AQ02539 215 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 PATJQ8NI35 1801 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 TGIF2-C20orf24A0A0A6YYL0 155 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 F12P00748 615 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 SSTR5P35346 364 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 SLC25A1P53007 311 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 SPINK14Q6IE38 97 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 ZNF275Q9NSD4 429 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 SYNGR1O43759 233 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 PLXNB2O15031 1838 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 ZNF770Q6IQ21 691 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 PARLQ9H300 379 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 HILPDAQ9Y5L2 63 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 A0A1W2PS18 150 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 CDS2O95674 445 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 AMY1AP04745 511 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 OR8B12Q8NGG6 310 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 OR2Y1Q8NGV0 311 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 NEU3Q9UQ49 428 aa12.84□□□□□ -0.35
SPTLC2-201ENST00000216484 HYPMO75409 117 aa12.83□□□□□ -0.35
SPTLC2-201ENST00000216484 TJP1Q07157 1748 aa12.83□□□□□ -0.35
SPTLC2-201ENST00000216484 ANOS1P23352 680 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 ASB5Q8WWX0 329 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 ZG16BQ96DA0 208 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 CDK2AP2O75956 126 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 DDA1Q9BW61 102 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 S1PR2O95136 353 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 NDUFB4O95168 129 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 TRGC2P03986 189 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 PSG2P11465 335 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 IGKV6D-21A0A0A0MT36 114 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 NTMQ9P121 344 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 PITX3O75364 302 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 OR2A4O95047 310 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 TMEM50BP56557 158 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 TMEM177Q53S58 311 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 OR2A7Q96R45 310 aa12.83□□□□□ -0.36
SPTLC2-201ENST00000216484 ETHE1O95571 254 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 VEGFBP49765 207 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 DPTQ07507 201 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 OR1P1Q8NH06 330 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 NUDT16L1Q9BRJ7 211 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 TRAV8-6A0A0B4J262 113 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 CXorf65A6NEN9 183 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 GDF9O60383 454 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 MPZL1O95297 269 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 KLKB1P03952 638 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 AICDAQ9GZX7 198 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 COL11A1P12107 1806 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 WFDC5Q8TCV5 224 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PPYP01298 95 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PF4V1P10720 104 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 PIGYQ3MUY2 71 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 ST6GAL2Q96JF0 529 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
SPTLC2-201ENST00000216484 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms