RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
SF3A1-201ENST00000215793 ELF5Q9UKW6 265 aaPredicted RBP11.76□□□□□ -0.53
SF3A1-201ENST00000215793 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 FGF5P12034 268 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
SF3A1-201ENST00000215793 LOXL4Q96JB6 756 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 IGHV1-45A0A0A0MS14 117 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 AREGP15514 252 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 OR10J1P30954 320 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 MPV17P39210 176 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 CCL8P80075 99 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 CALHM1Q8IU99 346 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 SLC22A18ASQ8N1D0 253 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 SF3B6Q9Y3B4 125 aaKnown RBP11.76□□□□□ -0.53
SF3A1-201ENST00000215793 APCSP02743 223 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 RIPPLY2Q5TAB7 128 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 SLC25A47Q6Q0C1 308 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 WDFY1Q8IWB7 410 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
SF3A1-201ENST00000215793 PRR33A8MZF0 331 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 HBZP02008 142 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 ID1P41134 155 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 PSMB2P49721 201 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 FAM3BP58499 235 aaPredicted RBP11.75□□□□□ -0.53
SF3A1-201ENST00000215793 DDA1Q9BW61 102 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
SF3A1-201ENST00000215793 MCM3APO60318 1980 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 MESP2Q0VG99 397 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 UBE2V2Q15819 145 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 DLX1P56177 255 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 FGF11Q92914 225 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 SCNM1Q9BWG6 230 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 DHRS7CA6NNS2 312 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 IFITM3Q01628 133 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 ECSCRQ19T08 205 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 CD200R1LQ6Q8B3 271 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 MYOZ3Q8TDC0 251 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 RHOVQ96L33 236 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 TNFRSF19Q9NS68 423 aa11.75□□□□□ -0.53
SF3A1-201ENST00000215793 A8MWL6 223 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
SF3A1-201ENST00000215793 WNT5AP41221 380 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 REG1BP48304 166 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 GBGT1Q8N5D6 347 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 RFLNBQ8N5W9 214 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 NRIP2Q9BQI9 281 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 RHBDL1O75783 438 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-201ENST00000215793 C19orf57Q0VDD7 668 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 FUT5Q11128 374 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 DSPPQ9NZW4 1301 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 A6NDN8 102 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 PKIBQ9C010 78 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 MT-ND6P03923 174 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 IL11P20809 199 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 SPANXN1Q5VSR9 72 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 KIR2DL2P43627 348 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-201ENST00000215793 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
SF3A1-201ENST00000215793 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 P2RX4Q99571 388 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 CCL13Q99616 98 aa11.74□□□□□ -0.53
SF3A1-201ENST00000215793 KLF7O75840 302 aaPredicted RBP11.73□□□□□ -0.53
SF3A1-201ENST00000215793 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
SF3A1-201ENST00000215793 ID4P47928 161 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 ZNF273Q14593 569 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 ZNF552Q9H707 407 aaPredicted RBP11.73□□□□□ -0.53
SF3A1-201ENST00000215793 HSF4Q9ULV5 492 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 CEACAM18A8MTB9 384 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 NDUFA2O43678 99 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 GCM2O75603 506 aaPredicted RBP11.73□□□□□ -0.53
SF3A1-201ENST00000215793 OR2H2O95918 312 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 C1QCP02747 245 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 MFAP2P55001 183 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 J3KRW8 73 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 MGPP08493 103 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms