RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-215ENST00000639856 TUBG1P23258 451 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 CAV2P51636 162 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF273Q14593 569 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 Q6ZR03 302 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 OR2C3Q8N628 320 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 GINS3Q9BRX5 216 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 HES4Q9HCC6 221 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 MSL2Q9HCI7 577 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 TUBG2Q9NRH3 451 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 TRAV39A0A0B4J263 110 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.38
TRIM3-215ENST00000639856 ADCYAP1P18509 176 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 POLR2GP62487 172 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRIM3-215ENST00000639856 FIP1L1Q6UN15 594 aaKnown RBP12.71□□□□□ -0.38
TRIM3-215ENST00000639856 BTNL8Q6UX41 500 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 MUCL1Q96DR8 90 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 TSNAXQ99598 290 aaKnown RBP12.71□□□□□ -0.38
TRIM3-215ENST00000639856 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.38
TRIM3-215ENST00000639856 TAAR3PQ9P1P4 343 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 WIPI2Q9Y4P8 454 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 POLEQ07864 2286 aa12.71□□□□□ -0.38
TRIM3-215ENST00000639856 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 WNT2P09544 360 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 SPP1P10451 314 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 KITLGP21583 273 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 F2RL1P55085 397 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 EWSR1Q01844 656 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM3-215ENST00000639856 ID3Q02535 119 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 TESK1Q15569 626 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 CXorf66Q5JRM2 361 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-215ENST00000639856 C10orf91Q5T1B1 145 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-215ENST00000639856 TREM1Q9NP99 234 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 PRELID1Q9Y255 219 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 ICE1Q9Y2F5 2266 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 ITPR1Q14643 2758 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 HAND1O96004 215 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 GCH1P30793 250 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 ID4P47928 161 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-215ENST00000639856 SWI5Q1ZZU3 235 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 Q6ZRG5 221 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 LRP11Q86VZ4 500 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 IQCF2Q8IXL9 164 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 C11orf53Q8IXP5 236 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 SVBPQ8N300 66 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 CXXC4Q9H2H0 198 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 UQCC1Q9NVA1 299 aa12.7□□□□□ -0.38
TRIM3-215ENST00000639856 FAM24AA6NFZ4 105 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 F8W036 122 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 HSPA12AO43301 675 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 IGLV2-14P01704 120 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 LMO1P25800 156 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 HMGN3Q15651 99 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 MBNL2Q5VZF2 373 aaKnown RBP12.69□□□□□ -0.38
TRIM3-215ENST00000639856 SPAG16Q8N0X2 631 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
TRIM3-215ENST00000639856 CARHSP1Q9Y2V2 147 aaKnown RBP12.69□□□□□ -0.38
TRIM3-215ENST00000639856 CHD3Q12873 2000 aaKnown RBP12.69□□□□□ -0.38
TRIM3-215ENST00000639856 ATP6V1G2-DDX39BF2Z307 99 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
TRIM3-215ENST00000639856 NUPL2O15504 423 aaKnown RBP12.68□□□□□ -0.38
TRIM3-215ENST00000639856 SSSCA1O60232 199 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 HEXAP06865 529 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 DANCRP0C864 163 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 ZNF826PQ6ZT77 177 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 AKR1E2Q96JD6 320 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 TLNRD1Q9H1K6 362 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 LYRM2Q9NU23 88 aaPredicted RBP12.68□□□□□ -0.38
TRIM3-215ENST00000639856 KIAA2026Q5HYC2 2103 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 ADGRG4Q8IZF6 3080 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 PSPNO60542 156 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 CRYAAP02489 173 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 SERPINE2P07093 398 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 PSG2P11465 335 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 MMP9P14780 707 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 MUC1P15941 1255 aaPredicted RBP12.68□□□□□ -0.38
TRIM3-215ENST00000639856 CEBPDP49716 269 aaPredicted RBP12.68□□□□□ -0.38
TRIM3-215ENST00000639856 RBPJQ06330 500 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 VHLLQ6RSH7 139 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 SLC25A31Q9H0C2 315 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 DUSP13Q9UII6 198 aa12.68□□□□□ -0.38
TRIM3-215ENST00000639856 TPRP12270 2363 aaKnown RBP12.67□□□□□ -0.38
TRIM3-215ENST00000639856 WNT9BO14905 357 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 SLC25A6P12236 298 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 VAMP2P63027 116 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 GUCA2BQ16661 112 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms