RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 AKAIN1P0CW23 69 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 PRTN3P24158 256 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 IFITM3Q01628 133 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 GUCA2AQ02747 115 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 MEF2CQ06413 473 aaPredicted RBP8.06□□□□□ -1.12
CLN3-261ENST00000637686 DEFB112Q30KQ8 113 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 C6orf183Q5T699 404 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 MZT2BQ6NZ67 158 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 ARRDC1Q8N5I2 433 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 C11orf42Q8N5U0 333 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 ZDHHC22Q8N966 263 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 FAM216AQ8WUB2 273 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 GCDHQ92947 438 aaPredicted RBP8.06□□□□□ -1.12
CLN3-261ENST00000637686 DUX5Q96PT3 197 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 PPA2Q9H2U2 334 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 UNKLQ9H9P5 680 aaKnown RBP8.06□□□□□ -1.12
CLN3-261ENST00000637686 ZNF286AQ9HBT8 521 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 Q9N2K0 584 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 ING3Q9NXR8 418 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 SLC2A8Q9NY64 477 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 OR6C3Q9NZP0 311 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 ZNF581Q9P0T4 197 aa8.06□□□□□ -1.12
CLN3-261ENST00000637686 hCG_1809904A0A1W2PP81 198 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 A0A1W2PPE2 198 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 A0A1W2PR64 198 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 A0A1W2PRV1 198 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 hADV38S2A0JD32 116 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 UBE2QL1A1L167 161 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 C17orf98A8MV24 154 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 NPIPB11E5RHQ5 1161 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 ZNF728P0DKX0 622 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 PTHLHP12272 177 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 GZMHP20718 246 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 GLIPR1P48060 266 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 DLX6P56179 175 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 P2RX3P56373 397 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 AESQ08117 197 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 BAMBIQ13145 260 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 HMGN3Q15651 99 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 RGS21Q2M5E4 152 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 KRBOX4Q5JUW0 171 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 ZNF57Q68EA5 555 aaPredicted RBP8.05□□□□□ -1.12
CLN3-261ENST00000637686 HCP5Q6MZN7 132 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 STEAP1BQ6NZ63 245 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 PNKDQ8N490 385 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 BEST4Q8NFU0 473 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 PLPPR1Q8TBJ4 325 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 CORO2AQ92828 525 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 SNAPC3Q92966 411 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 COQ2Q96H96 371 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 LINC00574Q9H8X3 128 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 COPZ2Q9P299 210 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 ELF5Q9UKW6 265 aaPredicted RBP8.05□□□□□ -1.12
CLN3-261ENST00000637686 TBC1D24Q9ULP9 559 aa8.05□□□□□ -1.12
CLN3-261ENST00000637686 A0A0U1RQK1 487 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 ODAMA1E959 279 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 DNAJC9-AS1A6NH13 148 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 TRDCB7Z8K6 153 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 NPFFO15130 113 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 PLA2G10O15496 165 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 LYRM1O43325 122 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 COX7A1P24310 79 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 UBE2E1P51965 193 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 HLA-DRB3P79483 266 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 MADCAM1Q13477 382 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 ATXN7L3Q14CW9 347 aaPredicted RBP8.04□□□□□ -1.12
CLN3-261ENST00000637686 SLC9A3R2Q15599 337 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 RNASE10Q5GAN6 216 aaKnown RBP8.04□□□□□ -1.12
CLN3-261ENST00000637686 Q6YL49 198 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 ZNF782Q6ZMW2 699 aaPredicted RBP8.04□□□□□ -1.12
CLN3-261ENST00000637686 RTN4RL2Q86UN3 420 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 ZNF565Q8N9K5 539 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 OR10A7Q8NGE5 316 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 OR5AP2Q8NGF4 316 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 OR4A4PQ8NGN8 299 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 OR4K15Q8NH41 348 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 DYRK2Q92630 601 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 ZNF714Q96N38 554 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 PRRT1Q99946 306 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 CABLES2Q9BTV7 478 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 C19orf24Q9BVV8 132 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 TOLLIPQ9H0E2 274 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 PRDM13Q9H4Q3 707 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 CHMP1AQ9HD42 196 aaPredicted RBP8.04□□□□□ -1.12
CLN3-261ENST00000637686 HRASLSQ9HDD0 168 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 TAS2R3Q9NYW6 316 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 UBE2J1Q9Y385 318 aaPredicted RBP8.04□□□□□ -1.12
CLN3-261ENST00000637686 LINC00312Q9Y6C7 94 aa8.04□□□□□ -1.12
CLN3-261ENST00000637686 TRGV10A0A0A0MS01 117 aa8.03□□□□□ -1.12
CLN3-261ENST00000637686 DISC1C4P0D8 188 aa8.03□□□□□ -1.12
CLN3-261ENST00000637686 FABP7O15540 132 aa8.03□□□□□ -1.12
CLN3-261ENST00000637686 RAB3DO95716 219 aa8.03□□□□□ -1.12
CLN3-261ENST00000637686 SLC6A1P30531 599 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms