RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CA6P23280 308 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 CRHBPP24387 322 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ETV6P41212 452 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 GPR6P46095 362 aaPredicted RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 GPM6AP51674 278 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 RND2P52198 227 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 H2BFSP57053 126 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 SEC61A1P61619 476 aaKnown RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 HBG1P69891 147 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 HBG2P69892 147 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF92Q03936 586 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF266Q14584 549 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF846Q147U1 533 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 BATFQ16520 125 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 CCL15Q16663 113 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ECSCRQ19T08 205 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 Q5BKY6 102 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 MESTQ5EB52 335 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF506Q5JVG8 444 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 IBA57Q5T440 356 aaKnown RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 BCL2L15Q5TBC7 163 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 RUSC1-AS1Q66K80 236 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 GLT8D1Q68CQ7 371 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF324BQ6AW86 544 aaPredicted RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 SLC35E4Q6ICL7 350 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 TMEM207Q6UWW9 146 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 DGAT2L6Q6ZPD8 337 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZNF788Q6ZQV5 615 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 C20orf196Q8IYI0 205 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 TCTE3Q8IZS6 198 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ZCCHC24Q8N2G6 241 aaKnown RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 EXOC3-AS1Q8N2X6 119 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 CIARTQ8N365 385 aaPredicted RBP2.42□□□□□ -2.02
VIM-210ENST00000637053 OR8B12Q8NGG6 310 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 OR10G6Q8NH81 332 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 CT55Q8WUE5 264 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 DDB2Q92466 427 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 TMEM230Q96A57 120 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 GPR146Q96CH1 333 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 STARD4Q96DR4 205 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 SLC25A38Q96DW6 304 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 MALSU1Q96EH3 234 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 SLC35E1Q96K37 410 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 FAM19A4Q96LR4 140 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 C9orf85Q96MD7 179 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 OR2M4Q96R27 311 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 OR2A7Q96R45 310 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 PRADC1Q9BSG0 188 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 LRRC61Q9BV99 259 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 GNB1LQ9BYB4 327 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 PBOV1Q9GZY1 135 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 WDR13Q9H1Z4 485 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 KLK15Q9H2R5 256 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 TMEM30AQ9NV96 361 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 EHFQ9NZC4 300 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 KCNIP1Q9NZI2 227 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 PAM16Q9Y3D7 125 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 MYH3P11055 1940 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 FRMPD3Q5JV73 1810 aa2.42□□□□□ -2.02
VIM-210ENST00000637053 ADAMTSL3P82987 1691 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 DENND4BO75064 1496 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 KTN1Q86UP2 1357 aaKnown RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 VIRMAQ69YN4 1812 aaKnown RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 SAA2-SAA4A0A096LPE2 208 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 LOC100131303A0A0U1RQF7 123 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 A0A1B0GXF2 115 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 C5orf63A6NC05 138 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SHISA9B4DS77 424 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 C8orf87E5RJ46 101 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 J3QT63 122 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 AIPO00170 330 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SLC17A2O00624 439 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 PHOX2AO14813 284 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 UPK1BO75841 260 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SNAPC5O75971 98 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 MAS1P04201 325 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 HLA-DQB2P05538 268 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR4Q2P0C623 313 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 AKAIN1P0CW23 69 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 RBMY1CP0DJD4 496 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SPNP16150 400 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 CHRNB2P17787 502 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ATP6V0CP27449 155 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 MYCNOSP40205 109 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 DEFA1P59665 94 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 S100A10P60903 97 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 IFITM3Q01628 133 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 HSD52Q0P140 79 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 IL15RAQ13261 267 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 C1DQ13901 141 aaKnown RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 HERPUD1Q15011 391 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 FAM74A1Q5RGS3 127 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 RPL22L1Q6P5R6 122 aaKnown RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 HRCT1Q6UXD1 115 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZNF793Q6ZN11 406 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 GTF2H5Q6ZYL4 71 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SLC35E3Q7Z769 313 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 CDC20BQ86Y33 519 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 C11orf53Q8IXP5 236 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms