RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	LYZL2	Q7Z4W2	148 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	TMEM144	Q7Z5S9	345 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	C1orf210	Q8IVY1	113 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	OR52M1	Q8NGK5	317 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	MAFA	Q8NHW3	353 aa	Predicted RBP	9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	ARHGAP5-AS1	Q96IT6	56 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	OR10A2	Q9H208	303 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	MRPL22	Q9NWU5	206 aa	Known RBP	9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	ALKBH4	Q9NXW9	302 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	NPIPA1	Q9UND3	350 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	EMC9	Q9Y3B6	208 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	PTRH2	Q9Y3E5	179 aa	Known RBP	9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	RFNG	Q9Y644	331 aa		9.26	□□□□□ -0.93
CHD2-223	ENST00000636306	LAMA3	Q16787	3333 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	IGLV1-36	A0A0B4J1U3	117 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	IGHV2-26	A0A0B4J1V2	119 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF814	B7Z6K7	855 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	PLPP3	O14495	311 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	IFNA5	P01569	189 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	REG1A	P05451	166 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF728	P0DKX0	622 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	SCGB1A1	P11684	91 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	IL3RA	P26951	378 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	GCH1	P30793	250 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	DYNLT3	P51808	116 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	PIGP	P57054	158 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	FBXW4	P57775	412 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	NHLH1	Q02575	133 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	FOXL1	Q12952	345 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	MRPL49	Q13405	166 aa	Known RBP	9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ACKR1	Q16570	336 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	SMIM21	Q3B7S5	101 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	SNAI3	Q3KNW1	292 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ABCA11P	Q4W5N1	156 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	SLC25A53	Q5H9E4	307 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	PRR27	Q6MZM9	219 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	MRPL14	Q6P1L8	145 aa	Known RBP	9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	RTN4RL2	Q86UN3	420 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	OR5C1	Q8NGR4	320 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	TMEM171	Q8WVE6	324 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	MSI2	Q96DH6	328 aa	Known RBP	9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	C1orf147	Q96MC9	270 aa	Predicted RBP	9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	PSMG3	Q9BT73	122 aa	Predicted RBP	9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	RTN4R	Q9BZR6	473 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	TUBG2	Q9NRH3	451 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF586	Q9NXT0	402 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	ELOVL5	Q9NYP7	299 aa		9.25	□□□□□ -0.93
CHD2-223	ENST00000636306	TRAV9-1	A0A075B6T8	112 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	LOC102723996	A0A087X1L8	192 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	P2RY10	O00398	339 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	NTN3	O00634	580 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	LMX1B	O60663	402 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	PDGFB	P01127	241 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	HLA-H	P01893	362 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF883	P0CG24	379 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	FAH	P16930	419 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	UCP1	P25874	307 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	NKX2-1	P43699	371 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	PPP1CB	P62140	327 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306		Q0VG73	95 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	VAMP3	Q15836	100 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	TMEM95	Q3KNT9	176 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	H1FNT	Q75WM6	255 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	C17orf78	Q8N4C9	275 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306		Q8N976	141 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	CCDC71L	Q8N9Z2	235 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	SPACA9	Q96E40	222 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF665	Q9H7R5	613 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	CHODL	Q9H9P2	273 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	CLN8	Q9UBY8	286 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	PPIAL4A	Q9Y536	164 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	RP1	P56715	2156 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	CUL9	Q8IWT3	2517 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306		A0A1W2PNV4	684 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306		A0A1W2PRS3	328 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	IGLC7	A0M8Q6	106 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF320	A2RRD8	509 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF878	C9JN71	531 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	DIRC3	C9JPN6	131 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	MSTN	O14793	375 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	RAMP3	O60896	148 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	GYPA	P02724	150 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	GNRHR	P30968	328 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	CDKN1A	P38936	164 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ASCL1	P50553	236 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	TLE3	Q04726	772 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	LRRC10	Q5BKY1	277 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	OR4S2	Q8NH73	311 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	ABHD3	Q8WU67	409 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	STARD4	Q96DR4	205 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	PECR	Q9BY49	303 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	GON4L	Q3T8J9	2241 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	TRIOBP	Q9H2D6	2365 aa		9.24	□□□□□ -0.93
CHD2-223	ENST00000636306	KNL1	Q8NG31	2342 aa		9.23	□□□□□ -0.93
CHD2-223	ENST00000636306	PI4KA	P42356	2102 aa		9.23	□□□□□ -0.93
CHD2-223	ENST00000636306		A0A0U1RQK1	487 aa		9.23	□□□□□ -0.93
CHD2-223	ENST00000636306	LRRC3C	A6NJW4	275 aa		9.23	□□□□□ -0.93
CHD2-223	ENST00000636306	HS3ST1	O14792	307 aa		9.23	□□□□□ -0.93
CHD2-223	ENST00000636306	ZNF823	P16415	610 aa		9.23	□□□□□ -0.93

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