RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MSMPQ1L6U9 139 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 ZNF718Q3SXZ3 478 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 TREM2Q9NZC2 230 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 NSG2Q9Y328 171 aa10.48□□□□□ -0.73
CIITA-212ENST00000618207 IGHV3-43A0A0B4J1X8 118 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 C1QL1O75973 258 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 F12P00748 615 aaPredicted RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 FAM157CP0CG43 387 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 IGHV3-43DP0DP04 118 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 CEACAM6P40199 344 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 NKX2-1P43699 371 aaPredicted RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 OR3A1P47881 315 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 GNMTQ14749 295 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 RTP5Q14D33 572 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 ZNF324BQ6AW86 544 aaPredicted RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 RIMS4Q9H426 269 aaPredicted RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 TMED3Q9Y3Q3 217 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 A0A0G2JRQ6 117 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 CST7O76096 145 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 PTBP3O95758 552 aaKnown RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 IGHV3-13P01766 116 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 IGHV3-7P01780 117 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
CIITA-212ENST00000618207 LPAR6P43657 344 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 FHITP49789 147 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 FAM27E3Q08E93 113 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 EDDM3AQ14507 147 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 C11orf53Q8IXP5 236 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 LRTM2Q8N967 370 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 OR4A4PQ8NGN8 299 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 OR1L1Q8NH94 360 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 MRGPRDQ8TDS7 321 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 ABHD17AQ96GS6 310 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 TAAR3PQ9P1P4 343 aa10.47□□□□□ -0.73
CIITA-212ENST00000618207 COL6A6A6NMZ7 2263 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.46□□□□□ -0.73
CIITA-212ENST00000618207 DEFB108AA8MXU0 73 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 CGAP01215 116 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 SERPINE2P07093 398 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 CTXN2P0C2S0 81 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 PTAFRP25105 342 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 NAAAQ02083 359 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 COTL1Q14019 142 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 SPRNQ5BIV9 151 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 Q6ZS49 121 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 C22orf34Q6ZV56 151 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 LINC00596Q86U02 117 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 ZNF808Q8N4W9 903 aaPredicted RBP10.46□□□□□ -0.73
CIITA-212ENST00000618207 DMBX1Q8NFW5 382 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 SH3BGRL3Q9H299 93 aa10.46□□□□□ -0.73
CIITA-212ENST00000618207 F2RP25116 425 aa10.46□□□□□ -0.74
CIITA-212ENST00000618207 WDR82Q6UXN9 313 aa10.46□□□□□ -0.74
CIITA-212ENST00000618207 ZNF497Q6ZNH5 498 aa10.46□□□□□ -0.74
CIITA-212ENST00000618207 Q6ZS92 163 aa10.46□□□□□ -0.74
CIITA-212ENST00000618207 H1FOOQ8IZA3 346 aaPredicted RBP10.46□□□□□ -0.74
CIITA-212ENST00000618207 CISD2Q8N5K1 135 aaKnown RBP10.46□□□□□ -0.74
CIITA-212ENST00000618207 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
CIITA-212ENST00000618207 IGHV3OR15-7A0A075B7D8 119 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 CDS2O95674 445 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 TMEM11P17152 192 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 S100PP25815 95 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 ZNF616Q08AN1 781 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 MAJINQ3KP22 176 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 IGF2-ASQ6U949 168 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 Q8IYB0 196 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 OR52L2PQ8NGH6 319 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 OR4D5Q8NGN0 318 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 LRRC46Q96FV0 321 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 DNTTIP1Q9H147 329 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 LPAR3Q9UBY5 353 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 TRBV23-1A0A0A0MS06 115 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 MBD3L4A6NDZ8 208 aaPredicted RBP10.45□□□□□ -0.74
CIITA-212ENST00000618207 MBD3L3A6NE82 208 aaPredicted RBP10.45□□□□□ -0.74
CIITA-212ENST00000618207 MBD3L5A6NJ08 208 aaPredicted RBP10.45□□□□□ -0.74
CIITA-212ENST00000618207 FGF16O43320 207 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 SPRY3O43610 288 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 GLIPR1P48060 266 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 LINC00205P59089 165 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 ZNF146Q15072 292 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 TESK1Q15569 626 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 MBD3L2Q8NHZ7 208 aaPredicted RBP10.45□□□□□ -0.74
CIITA-212ENST00000618207 LRRC29Q8WV35 223 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 ARL11Q969Q4 196 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 CXXC4Q9H2H0 198 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 PIGMQ9H3S5 423 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 SLC25A15Q9Y619 301 aa10.45□□□□□ -0.74
CIITA-212ENST00000618207 J3QW42 95 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 JTBO76095 146 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 IL2RGP31785 369 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 SSTR5P35346 364 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms