RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CACNG4Q9UBN1 327 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 A0A1B0GX78 115 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 CDIPTO14735 213 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 TIMM23BQ5SRD1 257 aa7.74□□□□□ -1.17
TTC28-208ENST00000612946 IFI6P09912 130 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 PPP2CBP62714 309 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 MYBPHQ13203 477 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 TIMD4Q96H15 378 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 TIMP1P01033 207 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 HBBP68871 147 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 BTAF1O14981 1849 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 FAM157CP0CG43 387 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 POU2AF1Q16633 256 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 GNB4Q9HAV0 340 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 SLC6A13Q9NSD5 602 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 KCNMB2Q9Y691 235 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 PAGE4O60829 102 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 ATP5LO75964 103 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 APOMO95445 188 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 EPPINO95925 133 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 TMIGD3P0DMS9 266 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 CTSSP25774 331 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 UBALD2Q8IYN6 164 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 OR10W1Q8NGF6 305 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 ODAMA1E959 279 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 C1orf194Q5T5A4 169 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 RNASEH2CQ8TDP1 164 aaKnown RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 MRGPRX1Q96LB2 322 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 KIR2DL1P43626 348 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 KIR2DL2P43627 348 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 ZNF141Q15928 474 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 WSB2Q9NYS7 404 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 NYNRINQ9P2P1 1898 aaKnown RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 LGALS4P56470 323 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 ZNF740Q8NDX6 193 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 BCAT2O15382 392 aaPredicted RBP7.73□□□□□ -1.17
TTC28-208ENST00000612946 ELNP15502 786 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 PSMB5P28074 263 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 APCDD1LQ8NCL9 501 aa7.73□□□□□ -1.17
TTC28-208ENST00000612946 OR11H12B2RN74 326 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 TNFRSF4P43489 277 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 OR11H1Q8NG94 326 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 OR11H2Q8NH07 326 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 MRPL32Q9BYC8 188 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 F12P00748 615 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 HOXB3P14651 431 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 OPRK1P41145 380 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 LSM6P62312 80 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 LAMTOR1Q6IAA8 161 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 AQP3Q92482 292 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 A6NCN8 305 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 M0QZ24 198 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 TMEM230Q96A57 120 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 WDYHV1Q96HA8 205 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 SRIP30626 198 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HSD52Q0P140 79 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 RDH5Q92781 318 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 DHCR7Q9UBM7 475 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 UFC1Q9Y3C8 167 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 MAS1LP35410 378 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 RND3P61587 244 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HYAL1Q12794 435 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 PSG5Q15238 335 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 DCAF12L2Q5VW00 463 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 Q6ZSR6 202 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 OR1N1Q8NGS0 311 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 SPSB4Q96A44 273 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 INSM2Q96T92 566 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 IGLV3-25P01717 112 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 GPR183P32249 361 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 PRDX4Q13162 271 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 CT83Q5H943 113 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 CTU1Q7Z7A3 348 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 SP6Q3SY56 376 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 TSACCQ96A04 125 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 DNAJB12Q9NXW2 375 aaKnown RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 MRM2Q9UI43 246 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms