RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 ADGRG4Q8IZF6 3080 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 AESQ08117 197 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR8G1Q15617 311 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 DHRS7BQ6IAN0 325 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF880Q6PDB4 577 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 LYPD6BQ8NI32 183 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 PKIBQ9C010 78 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 OPN3Q9H1Y3 402 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPACA1Q9HBV2 294 aa11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 LYRM2Q9NU23 88 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 ANKRD11Q6UB99 2663 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-202ENST00000612467 A6NLC8 198 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 H0Y980 276 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 TXNL1O43396 289 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 SERPINE2P07093 398 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 SNRNP70P08621 437 aaKnown RBP11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 FBP1P09467 338 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 CEACAM6P40199 344 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 CEBPGP53567 150 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 ID3Q02535 119 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 CLCC1Q96S66 551 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 PLK3Q9H4B4 646 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 OPA3Q9H6K4 179 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 CACNG5Q9UF02 275 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF318Q5VUA4 2279 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 LRP5LA4QPB2 252 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF497Q6ZNH5 498 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 RPRMLQ8N4K4 120 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF808Q8N4W9 903 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 WDR31Q8NA23 367 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR5D13Q8NGL4 314 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 TAAR6Q96RI8 345 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 PLEKHF2Q9H8W4 249 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 RNF115Q9Y4L5 304 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 NUDT19A8MXV4 375 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 K7N7A8 449 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGKV1-5P01602 117 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 PGA5P0DJD9 388 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 SRPXP78539 464 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
PCDHGA3-202ENST00000612467 CRYBA1P05813 215 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 CTXN2P0C2S0 81 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 OR3A1P47881 315 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 SRSF7Q16629 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 LTC4SQ16873 150 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 RFESDQ8TAC1 157 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 C5orf30Q96GV9 206 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 PTPRZ1P23471 2315 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 H7C2Y5 167 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 RAMP3O60896 148 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 HAND1O96004 215 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 TGFBR3Q03167 851 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 ARL16Q0P5N6 197 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 Q6ZT83 130 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 ZNF610Q8N9Z0 462 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPIN2AQ99865 258 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPIN2BQ9BPZ2 258 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 MLXQ9UH92 298 aa11.87□□□□□ -0.51
PCDHGA3-202ENST00000612467 PLCE1Q9P212 2302 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 DEFB108AA8MXU0 73 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGHV3-13P01766 116 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 IGHV3-7P01780 117 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 CECR9P0C854 216 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 HAGHQ16775 308 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 SPRNQ5BIV9 151 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 FAM180AQ6UWF9 173 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 C12orf57Q99622 126 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 KALRNO60229 2985 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 M0R036 132 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 PITX3O75364 302 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 METTL15P1P0C7V9 234 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 DRAM1Q8N682 238 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 MRGPRDQ8TDS7 321 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 C14orf79Q96F83 325 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 RSG1Q9BU20 258 aa11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA3-202ENST00000612467 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms