RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TMEM56Q96MV1 263 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 TMEM56-RWDD3S4R434 201 aa17.4■□□□□ 0.38
SSBP3-216ENST00000610401 CADP27708 2225 aa17.39■□□□□ 0.38
SSBP3-216ENST00000610401 COL5A1P20908 1838 aaPredicted RBP17.39■□□□□ 0.38
SSBP3-216ENST00000610401 A0A0U1RQK1 487 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 FOLR3P41439 243 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 Q0VFX4 171 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 EIF3IQ13347 325 aaKnown RBP17.39■□□□□ 0.37
SSBP3-216ENST00000610401 LINC00696Q6ZRV3 163 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 C1orf87Q8N0U7 546 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 CLDN23Q96B33 292 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 THOC3Q96J01 351 aaKnown RBP17.39■□□□□ 0.37
SSBP3-216ENST00000610401 SMIM7Q9BQ49 75 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 TMEM204Q9BSN7 226 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 UCP3P55916 312 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 B3GALT5-AS1P59052 145 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 LHX4Q969G2 390 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 RCC1LQ96I51 464 aaKnown RBP17.39■□□□□ 0.37
SSBP3-216ENST00000610401 PRDM13Q9H4Q3 707 aa17.39■□□□□ 0.37
SSBP3-216ENST00000610401 ZNF729A6NN14 1252 aaPredicted RBP17.38■□□□□ 0.37
SSBP3-216ENST00000610401 MMP7P09237 267 aaPredicted RBP17.38■□□□□ 0.37
SSBP3-216ENST00000610401 FAM90A2PQ658T7 463 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 SAP25Q8TEE9 199 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 MALSU1Q96EH3 234 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 TRAPPC2LQ9UL33 140 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 SEC14L6B5MCN3 397 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 LMO1P25800 156 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 ZNF506Q5JVG8 444 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 MAFAQ8NHW3 353 aaPredicted RBP17.38■□□□□ 0.37
SSBP3-216ENST00000610401 RNF115Q9Y4L5 304 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 ATMQ13315 3056 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 HSPB1P04792 205 aaKnown RBP17.38■□□□□ 0.37
SSBP3-216ENST00000610401 SNRPCP09234 159 aaKnown RBP17.38■□□□□ 0.37
SSBP3-216ENST00000610401 SRPXP78539 464 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 FOXL2NBQ6ZUU3 175 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 ZNF295-AS1Q8N0V1 137 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 C14orf144Q96I85 54 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 OR4C12Q96R67 309 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 C11orf1Q9H5F2 150 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 TREM2Q9NZC2 230 aa17.38■□□□□ 0.37
SSBP3-216ENST00000610401 CEP192Q8TEP8 1941 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 A0A087X0M5 115 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 A0A1B0GX30 115 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 GJE1A6NN92 205 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 UCP1P25874 307 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 PMELP40967 661 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 OR8B8Q15620 311 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 DMRTC2Q8IXT2 367 aaPredicted RBP17.37■□□□□ 0.37
SSBP3-216ENST00000610401 TPRX1Q8N7U7 411 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 EP300Q09472 2414 aaPredicted RBP17.37■□□□□ 0.37
SSBP3-216ENST00000610401 LOC102723971A0A1B0GUV8 181 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 BCL2P10415 239 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 IDH3GP51553 393 aaPredicted RBP17.37■□□□□ 0.37
SSBP3-216ENST00000610401 TCEAL6Q6IPX3 200 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 BTNL3Q6UXE8 466 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 SLC39A9Q9NUM3 307 aa17.37■□□□□ 0.37
SSBP3-216ENST00000610401 SMCO3A2RU48 225 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 MAP1LC3B2A6NCE7 125 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 CLDN34H7C241 214 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 IGKV1-39P01597 117 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 IGKV1D-39P04432 117 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 UBE2G2P60604 165 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 P2RY6Q15077 328 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 LURAP1LQ8IV03 231 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 ADGRG7Q96K78 797 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 MAP1LC3BQ9GZQ8 125 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 UBE2ZQ9H832 354 aaPredicted RBP17.36■□□□□ 0.37
SSBP3-216ENST00000610401 CLN8Q9UBY8 286 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 WASF3Q9UPY6 502 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 SYNGR2O43760 224 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 APLNRP35414 380 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 PCBD1P61457 104 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 DUSP23Q9BVJ7 150 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 ATP23Q9Y6H3 246 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 ZNF737O75373 536 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 GRPP07492 148 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 FKBP2P26885 142 aaKnown RBP17.36■□□□□ 0.37
SSBP3-216ENST00000610401 FGF12P61328 243 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 PCSK4Q6UW60 755 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 ASCL4Q6XD76 172 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 SPEM1Q8N4L4 309 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 OR10V1Q8NGI7 309 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 SDSLQ96GA7 329 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 FAM234AQ9H0X4 552 aa17.36■□□□□ 0.37
SSBP3-216ENST00000610401 A0A1B0GUS0 222 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 CRYAAP02489 173 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 NDUFB7P17568 137 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 HAPLN4Q86UW8 402 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 OR2Y1Q8NGV0 311 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 TRAV24A0A0B4J272 114 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 LRRC3CA6NJW4 275 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 C16orf82Q7Z2V1 217 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 OR4F5Q8NH21 305 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 MRPL30Q8TCC3 161 aaKnown RBP17.35■□□□□ 0.37
SSBP3-216ENST00000610401 OR4F4Q96R69 305 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 PCGF1Q9BSM1 259 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 OR2W1Q9Y3N9 320 aa17.35■□□□□ 0.37
SSBP3-216ENST00000610401 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
SSBP3-216ENST00000610401 DEFB108AA8MXU0 73 aa17.34■□□□□ 0.37
SSBP3-216ENST00000610401 DEGS1O15121 323 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms