RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 LOC105371242A0A075B767 164 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 A0A1W2PPH5 198 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 SLC33A1O00400 549 aaPredicted RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 SDCBPO00560 298 aaPredicted RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 ENSAO43768 121 aaKnown RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 OR2H2O95918 312 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 C1QBP02746 253 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 OR5H8P0DN80 308 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 NDUFB7P17568 137 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 HNF1AP20823 631 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 ZBTB25P24278 435 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 GLP1RP43220 463 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 KCNJ3P48549 501 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 PAN3Q58A45 887 aaKnown RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 DCAF12L2Q5VW00 463 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 ZNF660Q6AZW8 331 aaPredicted RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 Q6ZPA2 131 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 LYG2Q86SG7 212 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 GAPTQ8N292 157 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 OR52B4Q8NGK2 314 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 OR5D13Q8NGL4 314 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 MRPL30Q8TCC3 161 aaKnown RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 CAPSLQ8WWF8 208 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 ASB13Q8WXK3 278 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 SNX22Q96L94 193 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 YAE1D1Q9NRH1 226 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 MGAT4CQ9UBM8 478 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 CTSZQ9UBR2 303 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 ZNF222Q9UK12 451 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 MGAT4AQ9UM21 535 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 POLR3KQ9Y2Y1 108 aaPredicted RBP8.35□□□□□ -1.07
UPF1-213ENST00000601981 HIVEP2P31629 2446 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
UPF1-213ENST00000601981 MTORP42345 2549 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 TRBV23-1A0A0A0MS06 115 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 OR5H14A6NHG9 310 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 J3QLI3 93 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 SIRPB1O00241 398 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 HSPB6O14558 160 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 FABP7O15540 132 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 PHF1O43189 567 aaPredicted RBP8.34□□□□□ -1.07
UPF1-213ENST00000601981 LY6G6DO95868 133 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 LIPFP07098 398 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 CTXN2P0C2S0 81 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 CXCL3P19876 107 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 LMO1P25800 156 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 SEC61A1P61619 476 aaKnown RBP8.34□□□□□ -1.07
UPF1-213ENST00000601981 DHODHQ02127 395 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 COL10A1Q03692 680 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 DHRS2Q13268 280 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 DHRS11Q6UWP2 260 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 ZNF841Q6ZN19 808 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 ZNF497Q6ZNH5 498 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 C17orf107Q6ZR85 190 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 NOXA1Q86UR1 476 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 C12orf45Q8N5I9 185 aaPredicted RBP8.34□□□□□ -1.07
UPF1-213ENST00000601981 CD177Q8N6Q3 437 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 ZNRF1Q8ND25 227 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 OR2AK2Q8NG84 335 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 ZNF2Q9BSG1 426 aaPredicted RBP8.34□□□□□ -1.07
UPF1-213ENST00000601981 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
UPF1-213ENST00000601981 FXYD6Q9H0Q3 95 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
UPF1-213ENST00000601981 IGHV2-70DA0A0C4DH43 119 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 C9orf170A2RU37 121 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 TRDCB7Z8K6 153 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 K7N7A8 449 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 MGST3O14880 152 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 HLA-AP01891 365 aaKnown RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 TK1P04183 234 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 CTSDP07339 412 aaPredicted RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 GIPP09681 153 aaPredicted RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 GSTT2P0CG29 244 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 PGAM2P15259 253 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 ERP29P30040 261 aaKnown RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 CEBPDP49716 269 aaPredicted RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 UCP3P55916 312 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 HLA-DRB3P79483 266 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 PPP1R1AQ13522 171 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 ADAD2Q8NCV1 583 aaKnown RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 OR4A4PQ8NGN8 299 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 ZFAND1Q8TCF1 268 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 TMEM230Q96A57 120 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 MOB3AQ96BX8 217 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 RTBDNQ9BSG5 229 aaPredicted RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 CABLES2Q9BTV7 478 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 C14orf166Q9Y224 244 aaKnown RBP8.33□□□□□ -1.08
UPF1-213ENST00000601981 MAB21L2Q9Y586 359 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 KIAA2026Q5HYC2 2103 aa8.33□□□□□ -1.08
UPF1-213ENST00000601981 A0A0B4J2A0 478 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms