RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 ZBTB25P24278 435 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 CD34P28906 385 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 HRH1P35367 487 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 OR3A3P47888 321 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 KLF9Q13886 244 aaPredicted RBP11.74□□□□□ -0.53
UPF1-211ENST00000600868 LY6G6FQ5SQ64 297 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 VAX1Q5SQQ9 334 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 NCR3LG1Q68D85 454 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 FAHD2BQ6P2I3 314 aaPredicted RBP11.74□□□□□ -0.53
UPF1-211ENST00000600868 OVCH2Q7RTZ1 564 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 TOMM5Q8N4H5 51 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 DEDD2Q8WXF8 326 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 FAHD2AQ96GK7 314 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 YPEL2Q96QA6 119 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 HEXA-AS1Q9H8Q6 139 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 SLC23A1Q9UHI7 598 aa11.74□□□□□ -0.53
UPF1-211ENST00000600868 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 BET1O15155 118 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 HSPA12AO43301 675 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 RGS11O94810 467 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 PMP2P02689 132 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 CD3DP04234 171 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 OR5H8P0DN80 308 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 NFYBP25208 207 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 RFX2P48378 723 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 DYRK1AQ13627 763 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 LTC4SQ16873 150 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 MORN2Q502X0 79 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 STEAP1BQ6NZ63 245 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 ZNF782Q6ZMW2 699 aaPredicted RBP11.73□□□□□ -0.53
UPF1-211ENST00000600868 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 SUCNR1Q9BXA5 334 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 SIRT7Q9NRC8 400 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 EHFQ9NZC4 300 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 OR1A1Q9P1Q5 309 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
UPF1-211ENST00000600868 ZNF469Q96JG9 3925 aaPredicted RBP11.73□□□□□ -0.53
UPF1-211ENST00000600868 ITGB1BP1O14713 200 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 UPK1BO75841 260 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 RAB3DO95716 219 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 HOXB4P17483 251 aaPredicted RBP11.72□□□□□ -0.53
UPF1-211ENST00000600868 CEACAM6P40199 344 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 INPP1P49441 399 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 GNMTQ14749 295 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 MEF2DQ14814 521 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 RNASE10Q5GAN6 216 aaKnown RBP11.72□□□□□ -0.53
UPF1-211ENST00000600868 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
UPF1-211ENST00000600868 HCP5Q6MZN7 132 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
UPF1-211ENST00000600868 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 GIMAP1Q8WWP7 306 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 GINS4Q9BRT9 223 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
UPF1-211ENST00000600868 TINAGL1Q9GZM7 467 aaPredicted RBP11.72□□□□□ -0.53
UPF1-211ENST00000600868 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 M0QYG6 137 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 TUSC2O75896 110 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 AVPP01185 164 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 IFNA6P05013 189 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
UPF1-211ENST00000600868 PPP1CCP36873 323 aaKnown RBP11.71□□□□□ -0.53
UPF1-211ENST00000600868 DLX1P56177 255 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 UTF1Q5T230 341 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.53
UPF1-211ENST00000600868 FAM53AQ6NSI3 398 aaPredicted RBP11.71□□□□□ -0.53
UPF1-211ENST00000600868 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ARRDC1Q8N5I2 433 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 LINC00311Q8N616 119 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 OR4D10Q8NGI6 311 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 OR4C16Q8NGL9 310 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 OR9G1Q8NH87 305 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 EDARADDQ8WWZ3 215 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ABCB10Q9NRK6 738 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 RDH8Q9NYR8 311 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 ZNF69Q9UC07 566 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 PSG11Q9UQ72 335 aa11.71□□□□□ -0.53
UPF1-211ENST00000600868 CELSR1Q9NYQ6 3014 aa11.7□□□□□ -0.54
UPF1-211ENST00000600868 ACANP16112 2415 aa11.7□□□□□ -0.54
UPF1-211ENST00000600868 FAM172BPA6NC97 362 aa11.7□□□□□ -0.54
UPF1-211ENST00000600868 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
UPF1-211ENST00000600868 J3QR06 171 aa11.7□□□□□ -0.54
UPF1-211ENST00000600868 ZNF735P0CB33 412 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms