RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 UBALD1Q8TB05 177 aa16.55■□□□□ 0.24
CLIP3-206ENST00000593074 COQ2Q96H96 371 aa16.55■□□□□ 0.24
CLIP3-206ENST00000593074 HRH4Q9H3N8 390 aa16.55■□□□□ 0.24
CLIP3-206ENST00000593074 KCNIP1Q9NZI2 227 aa16.55■□□□□ 0.24
CLIP3-206ENST00000593074 APC2O95996 2303 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 A0A0G2JRQ6 117 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 IGSF23A1L1A6 192 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 ABCD4O14678 606 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 SIGLEC5O15389 551 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 PITX3O75364 302 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 CEACAM6P40199 344 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 OR3A1P47881 315 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 BTNL8Q6UX41 500 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 FAM212BQ9NTI7 297 aaPredicted RBP16.54■□□□□ 0.24
CLIP3-206ENST00000593074 A0A1B0GU03 582 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 OOEPA6NGQ2 149 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 C12orf77C9JDV5 145 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 CD200P41217 278 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 CAV2P51636 162 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 SRSF3P84103 164 aaKnown RBP16.54■□□□□ 0.24
CLIP3-206ENST00000593074 BTN1A1Q13410 526 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 LYPD6BQ8NI32 183 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 LIN7CQ9NUP9 197 aaKnown RBP16.54■□□□□ 0.24
CLIP3-206ENST00000593074 RNF115Q9Y4L5 304 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 SPEF1Q9Y4P9 236 aa16.54■□□□□ 0.24
CLIP3-206ENST00000593074 LAMA5O15230 3695 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 FAM24AA6NFZ4 105 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 A8MXE2 369 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 IGKV1-39P01597 117 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 CRYAAP02489 173 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 IGKV1D-39P04432 117 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 AKR1C2P52895 323 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 F2RL1P55085 397 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 AKR1C1Q04828 323 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 ATRAIDQ6UW56 229 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 GFRALQ6UXV0 394 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 C17orf50Q8WW18 174 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 LRRC46Q96FV0 321 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 TOLLIPQ9H0E2 274 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 MAGT1Q9H0U3 335 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 PLEKHF2Q9H8W4 249 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 KCNS2Q9ULS6 477 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 PPP1R3CQ9UQK1 317 aa16.53■□□□□ 0.24
CLIP3-206ENST00000593074 RBM7Q9Y580 266 aaKnown RBP16.53■□□□□ 0.24
CLIP3-206ENST00000593074 ATG12O94817 140 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 IGHV3-13P01766 116 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 OR8U9P0C7N5 309 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 ADCYAP1P18509 176 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 BMP5P22003 454 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 PAX5Q02548 391 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 AESQ08117 197 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 Q6ZRG5 221 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 DRAM1Q8N682 238 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 OR2Z1Q8NG97 314 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 OR8U1Q8NH10 309 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 OR1L1Q8NH94 360 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 LSM10Q969L4 123 aaKnown RBP16.52■□□□□ 0.24
CLIP3-206ENST00000593074 GALMQ96C23 342 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 GPR146Q96CH1 333 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 SLC25A31Q9H0C2 315 aa16.52■□□□□ 0.24
CLIP3-206ENST00000593074 TMEM50AO95807 157 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 DANCRP0C864 163 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 VAMP2P63027 116 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 NKX6-1P78426 367 aaPredicted RBP16.52■□□□□ 0.23
CLIP3-206ENST00000593074 C10orf91Q5T1B1 145 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 TMEM252Q8N6L7 170 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 LRRC29Q8WV35 223 aa16.52■□□□□ 0.23
CLIP3-206ENST00000593074 CUL9Q8IWT3 2517 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 DEFA5Q01523 94 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 COL10A1Q03692 680 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 FAM27E3Q08E93 113 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 LRP11Q86VZ4 500 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 ODF3L1Q8IXM7 274 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 MGAQ8IWI9 3026 aa16.51■□□□□ 0.23
CLIP3-206ENST00000593074 HBZP02008 142 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 TFF1P04155 84 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 GLRXP35754 106 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 CFHR2P36980 270 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 BAXQ07812 192 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 ZNF266Q14584 549 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 SWI5Q1ZZU3 235 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 ZNF585BQ52M93 769 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 ZNF645Q8N7E2 425 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 OR10Z1Q8NGY1 313 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 DUSP13Q9UII6 198 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 METRNQ9UJH8 293 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 A0A0G2JNJ9 132 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 KIAA1324LA8MWY0 1029 aaPredicted RBP16.5■□□□□ 0.23
CLIP3-206ENST00000593074 SRRM5B3KS81 715 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 EPHA1P21709 976 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 GABRA2P47869 451 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 KRBOX4Q5JUW0 171 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 SPAG16Q8N0X2 631 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 SH3BGRL3Q9H299 93 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 Q9UFV3 132 aa16.5■□□□□ 0.23
CLIP3-206ENST00000593074 CARHSP1Q9Y2V2 147 aaKnown RBP16.5■□□□□ 0.23
CLIP3-206ENST00000593074 CHD3Q12873 2000 aaKnown RBP16.49■□□□□ 0.23
CLIP3-206ENST00000593074 RNF212BA8MTL3 300 aa16.49■□□□□ 0.23
CLIP3-206ENST00000593074 CHST1O43916 411 aa16.49■□□□□ 0.23
CLIP3-206ENST00000593074 MUC1P15941 1255 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms