RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 EDDM3BP56851 147 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 KLF17Q5JT82 389 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-208ENST00000588667 OR5AP2Q8NGF4 316 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 MAFIPQ8WZ33 124 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 TBX15Q96SF7 602 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 PPA2Q9H2U2 334 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 ANXA10Q9UJ72 324 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 A0A1W2PPH5 198 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 M0R1W7 72 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 CSN2P05814 226 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 ZNF735P0CB33 412 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 ARPC4P59998 168 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 EDDM3AQ14507 147 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 SRSF7Q16629 238 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATG4D-208ENST00000588667 TMEM200BQ69YZ2 307 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 IDO2Q6ZQW0 420 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 C1orf122Q6ZSJ8 110 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 ARRDC1Q8N5I2 433 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 SLC6A7Q99884 636 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 SLC25A21Q9BQT8 299 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-208ENST00000588667 GINS4Q9BRT9 223 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 ZNF286AQ9HBT8 521 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 CUBNO60494 3623 aa16.54■□□□□ 0.24
ATG4D-208ENST00000588667 TRAV40A0A0B4J280 105 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 POM121CA8CG34 1229 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 PFDN1O60925 122 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 NAPSAO96009 420 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 EPHA1P21709 976 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 ERP29P30040 261 aaKnown RBP16.53■□□□□ 0.24
ATG4D-208ENST00000588667 TATDN3Q17R31 274 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 TMEM17Q86X19 198 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 CADM3Q8N126 398 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 NUP50Q9UKX7 468 aa16.53■□□□□ 0.24
ATG4D-208ENST00000588667 P2RX3P56373 397 aa16.52■□□□□ 0.24
ATG4D-208ENST00000588667 RAB25P57735 213 aa16.52■□□□□ 0.24
ATG4D-208ENST00000588667 MEF2CQ06413 473 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-208ENST00000588667 SCGB2B2Q4G0G5 96 aa16.52■□□□□ 0.24
ATG4D-208ENST00000588667 hADV38S2A0JD32 116 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 PEX14O75381 377 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 IGHV4-38-2P0DP08 117 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 KCNJ3P48549 501 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 TSPAN5P62079 268 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF273Q14593 569 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 CDK10Q15131 360 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 GPR157Q5UAW9 335 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 Q6ZS49 121 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 VMO1Q7Z5L0 202 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 Q8N7P7 452 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 METTL8Q9H825 291 aaKnown RBP16.52■□□□□ 0.23
ATG4D-208ENST00000588667 EHFQ9NZC4 300 aa16.52■□□□□ 0.23
ATG4D-208ENST00000588667 IGKV1D-8A0A087WSZ0 117 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 TRBV6-6A0A0A6YYG2 114 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 ARPC1BO15143 372 aaKnown RBP16.51■□□□□ 0.23
ATG4D-208ENST00000588667 IFNA2P01563 188 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 ATXN7L3Q14CW9 347 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-208ENST00000588667 OVCH2Q7RTZ1 564 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 TPRX1Q8N7U7 411 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 UNKLQ9H9P5 680 aaKnown RBP16.51■□□□□ 0.23
ATG4D-208ENST00000588667 Q9N2K0 584 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 NECAP2Q9NVZ3 263 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 LINC00312Q9Y6C7 94 aa16.51■□□□□ 0.23
ATG4D-208ENST00000588667 KIR2DS4P43632 304 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 AESQ08117 197 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 KIR2DS1Q14954 304 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 TCF23Q7RTU1 214 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 MRPL30Q8TCC3 161 aaKnown RBP16.5■□□□□ 0.23
ATG4D-208ENST00000588667 SIRT7Q9NRC8 400 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 FLVCR2Q9UPI3 526 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 ATRQ13535 2644 aa16.5■□□□□ 0.23
ATG4D-208ENST00000588667 IGHV3OR16-10A0A075B7F0 116 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 A0A0B4J293 547 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 hCG_1809904A0A1W2PP81 198 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 A0A1W2PPE2 198 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 A0A1W2PR64 198 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 A0A1W2PRV1 198 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 PRAF2O60831 178 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 CCL3L1P16619 93 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 BPIFB3P59826 476 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 PAX5Q02548 391 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 KRBOX4Q5JUW0 171 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF497Q6ZNH5 498 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 MOB1BQ7L9L4 216 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 COQ2Q96H96 371 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 MGAT4AQ9UM21 535 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 ALG5Q9Y673 324 aa16.49■□□□□ 0.23
ATG4D-208ENST00000588667 CENPVL3A0A0U1RRI6 287 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 RLN1P04808 185 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF728P0DKX0 622 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 PRTN3P24158 256 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 FPR2P25090 351 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 MECP2P51608 486 aaKnown RBP16.48■□□□□ 0.23
ATG4D-208ENST00000588667 DLX6P56179 175 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 Q6ZPA2 131 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 PRIMA1Q86XR5 153 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 GAPTQ8N292 157 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 OR13C8Q8NGS7 320 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 TERB2Q8NHR7 220 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 LHX4Q969G2 390 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF714Q96N38 554 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF69Q9UC07 566 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms