RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 OR4A4PQ8NGN8 299 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 FGF23Q9GZV9 251 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 H7C2Y5 167 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 PGLYRP1O75594 196 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 HKR1P10072 659 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 ZNF266Q14584 549 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 ZNF345Q14585 488 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 MIDNQ504T8 468 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 TMEM108Q6UXF1 575 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 GLRX5Q86SX6 157 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 STPG2Q8N412 459 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 STARD4Q96DR4 205 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 HEYLQ9NQ87 328 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 RUNX1Q01196 453 aa10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 MRPL30Q8TCC3 161 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-208ENST00000585799 TUBAL3A6NHL2 446 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 IFNA4P05014 189 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 G6PCP35575 357 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 FHITP49789 147 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 SAXO1Q8IYX7 474 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 GP6Q9HCN6 339 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 GFRA3O60609 400 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 DEDDO75618 318 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 DYNLT3P51808 116 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 DHRS11Q6UWP2 260 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 CLEC18AA5D8T8 446 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 C16orf97H3BN30 126 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 GPR37O15354 613 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 TMPRSS2O15393 492 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 OPN1MWP04001 364 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 ZNF14P17017 642 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM53AQ6NSI3 398 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 MOB1BQ7L9L4 216 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 CLEC18CQ8NCF0 446 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 LHFPL5Q8TAF8 219 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 CCL13Q99616 98 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 WIPI2Q9Y4P8 454 aa10.55□□□□□ -0.72
SMARCA4-208ENST00000585799 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 IGHV1-18A0A0C4DH31 117 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 ZFP92A6NM28 416 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 TSPAN9O75954 239 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 MDH2P40926 338 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 LYG1Q8N1E2 194 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 SVBPQ8N300 66 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 C17orf50Q8WW18 174 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 PBDC1Q9BVG4 233 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 BAXQ07812 192 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 OR4A16Q8NH70 328 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 RCC2Q9P258 522 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 ATG12O94817 140 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 CD37P11049 281 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 SELENOHQ8IZQ5 122 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 AKR1E2Q96JD6 320 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
SMARCA4-208ENST00000585799 PSPNO60542 156 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 IGHG3P01860 377 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 MPZP25189 248 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 NKX6-1P78426 367 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 GPR146Q96CH1 333 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 DHRS9Q9BPW9 319 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 TMEM210A6NLX4 147 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 SOX15O60248 233 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 PTBP3O95758 552 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 SELLP14151 372 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 ZP3P21754 424 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 OR2B8PP59922 312 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 SH3BGRL3Q9H299 93 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 PRELID3BQ9Y3B1 194 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 LRRC30A6NM36 301 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 C12orf77C9JDV5 145 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 GYPAP02724 150 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 PJVKQ0ZLH3 352 aa10.53□□□□□ -0.72
SMARCA4-208ENST00000585799 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms