RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 FPR2P25090 351 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 UCP3P55916 312 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 LOXL1Q08397 574 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 WDR25Q64LD2 544 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 MAPK1IP1LQ8NDC0 245 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 OR52M1Q8NGK5 317 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DCTN5Q9BTE1 182 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 MMP28Q9H239 520 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 OR2S2Q9NQN1 319 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 GNG12Q9UBI6 72 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4Q9UBX2 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 OR2W1Q9Y3N9 320 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 OTOGQ6ZRI0 2925 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ZFHX3Q15911 3703 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 TRAV39A0A0B4J263 110 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 F5H0A9 414 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 F2RL2O00254 374 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ARPC1BO15143 372 aaKnown RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 FOXH1O75593 365 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 PPYP01298 95 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 CEACAM6P40199 344 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 LUMP51884 338 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 UBE2MP61081 183 aaKnown RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 Q6ZPA2 131 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 DACT3Q96B18 629 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 CYYR1Q96J86 154 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 LINC00574Q9H8X3 128 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
CSNK1D-209ENST00000578904 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 LOC105371242A0A075B767 164 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 C15orf65H3BRN8 121 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 YPEL1O60688 119 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 TUSC2O75896 110 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 RBP4P02753 201 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 LIPFP07098 398 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 SPNP16150 400 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 AADACP22760 399 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 SSTR5P35346 364 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 RAB7AP51149 207 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 FXYD4P59646 89 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 LMO4P61968 165 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 Q3ZCU0 254 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 LY6G6FQ5SQ64 297 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 METTL11BQ5VVY1 283 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 TMEM200BQ69YZ2 307 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 ZNF841Q6ZN19 808 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 CMTM1Q8IZ96 169 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 OR13C8Q8NGS7 320 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 UPRTQ96BW1 309 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 YPEL2Q96QA6 119 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 TOLLIPQ9H0E2 274 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 GHITMQ9H3K2 345 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 C19orf12Q9NSK7 152 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 RDH8Q9NYR8 311 aa11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 RPUSD1Q9UJJ7 312 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-209ENST00000578904 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 PIGBOS1A0A0B4J2F0 54 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 OR5H14A6NHG9 310 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 ITGB1BP1O14713 200 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 ENSAO43768 121 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 IL5P05113 134 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 CTSDP07339 412 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 CGB3P0DN86 165 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 CGB7P0DN87 165 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 MECP2P51608 486 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 AADACL3Q5VUY0 350 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 HEPN1Q6WQI6 88 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 ZBTB34Q8NCN2 500 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 RFESDQ8TAC1 157 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 AKR1E2Q96JD6 320 aa11.48□□□□□ -0.57
CSNK1D-209ENST00000578904 SLC5A7Q9GZV3 580 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms