RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 RSU1Q15404 277 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 CCDC58Q4VC31 144 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 STX19Q8N4C7 294 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 TMEM104Q8NE00 496 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 OR5AK2Q8NH90 309 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 MUC7Q8TAX7 377 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 MRPS24Q96EL2 167 aaKnown RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 CST11Q9H112 138 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 PLSCR3Q9NRY6 295 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 MRPS18AQ9NVS2 196 aaKnown RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 FAM90A10PA6NDY2 464 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 FAM90A7PA6NKC0 464 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 FAM90A23PA8MXZ1 464 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 C15orf65H3BRN8 121 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 CD2P06729 351 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 ECI1P42126 302 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 CRIP2P52943 208 aaPredicted RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 GBX2P52951 348 aaPredicted RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 SLC25A48Q6ZT89 311 aaKnown RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 TCTEX1D1Q8N7M0 179 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 PLPPR1Q8TBJ4 325 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 TNFAIP8L1Q8WVP5 186 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 C4orf36Q96KX1 117 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 WDR12Q9GZL7 423 aaKnown RBP8.79□□□□□ -1
SMARCE1-214ENST00000578112 GAB2Q9UQC2 676 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 VSIG4Q9Y279 399 aa8.79□□□□□ -1
SMARCE1-214ENST00000578112 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 SDCBPO00560 298 aaPredicted RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 GPX5O75715 221 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 MAPK3P27361 379 aaPredicted RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 RBM11P57052 281 aaKnown RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 RGS21Q2M5E4 152 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 FAM27D1Q5T7N8 215 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 FAM71F2Q6NXP2 309 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 LCNL1Q6ZST4 164 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 C18orf65Q6ZTR6 163 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 GAPTQ8N292 157 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 SUMF2Q8NBJ7 301 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 SLC29A1Q99808 456 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 ALG8Q9BVK2 526 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 DNAH9Q9NYC9 4486 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 NCBP2LA6PVI3 153 aaKnown RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 J3QLW9 94 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 FADS2O95864 444 aaKnown RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 CALCBP10092 127 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 ZNF19P17023 458 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 GNG10P50151 68 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 RAB40BQ12829 278 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 OR5D18Q8NGL1 313 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 GPER1Q99527 375 aa8.78□□□□□ -1
SMARCE1-214ENST00000578112 MRPS28Q9Y2Q9 187 aaKnown RBP8.78□□□□□ -1
SMARCE1-214ENST00000578112 A8MZ25 164 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 H3BSH0 61 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 SPINT2O43291 252 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 HLA-DRB1P01911 266 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 LUMP51884 338 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF497Q6ZNH5 498 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 LYPD6Q86Y78 171 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF439Q8NDP4 499 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 OR51A4Q8NGJ6 313 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 OR10AC1Q8NH08 325 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 GPR148Q8TDV2 347 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 TSEN15Q8WW01 171 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 LGALS12Q96DT0 336 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 KCTD7Q96MP8 289 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 RCC2Q9P258 522 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ERGIC3Q9Y282 383 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 IRGMA1A4Y4 181 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 CSTBP04080 98 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF616Q08AN1 781 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 GPR141Q7Z602 305 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF491Q8N8L2 437 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 OR6Q1Q8NGQ2 317 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 OR52N1Q8NH53 320 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ARL11Q969Q4 196 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 S100A13Q99584 98 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 TMEM138Q9NPI0 162 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF107Q9UII5 783 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 SPATA2Q9UM82 520 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 ST3GAL6Q9Y274 331 aa8.77□□□□□ -1.01
SMARCE1-214ENST00000578112 I3L521 148 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 SSTR5P35346 364 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 RAB25P57735 213 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 PPP3R1P63098 170 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 DIAPH2-AS1Q14236 149 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 RPL22L1Q6P5R6 122 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 TMEM65Q6PI78 240 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 OR1N2Q8NGR9 330 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 SPACA5Q96QH8 159 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 PRR25Q96S07 402 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 OR51J1Q9H342 316 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 ERVK13-1Q9NX77 482 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 OAZ3Q9UMX2 235 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 MAGEA13PA6NCF6 341 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 RGS13O14921 159 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 HTR3BO95264 441 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms