RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 SYS1Q8N2H4 156 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 MINDY2Q8NBR6 621 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 NEK7Q8TDX7 302 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 TRUB1Q8WWH5 349 aaKnown RBP14.77□□□□□ -0.05
NUP88-203ENST00000572019 MRPL20Q9BYC9 149 aaKnown RBP14.77□□□□□ -0.05
NUP88-203ENST00000572019 TOLLIPQ9H0E2 274 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 ERVK13-1Q9NX77 482 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 GNG12Q9UBI6 72 aa14.77□□□□□ -0.05
NUP88-203ENST00000572019 HBZP02008 142 aa14.76□□□□□ -0.05
NUP88-203ENST00000572019 IGHV4-30-4P0DP06 118 aa14.76□□□□□ -0.05
NUP88-203ENST00000572019 RCC1P18754 421 aaPredicted RBP14.76□□□□□ -0.05
NUP88-203ENST00000572019 METTL9Q9H1A3 318 aa14.76□□□□□ -0.05
NUP88-203ENST00000572019 MAGEB3O15480 346 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 TXNL1O43396 289 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 LANCL1O43813 399 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 HLA-DRB1P01911 266 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 ALPLP05186 524 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 RPSAP08865 295 aaKnown RBP14.75□□□□□ -0.05
NUP88-203ENST00000572019 ECSCRQ19T08 205 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 Q3ZCU0 254 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 SLC22A6Q4U2R8 563 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 DDI2Q5TDH0 399 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 OR13C5Q8NGS8 318 aa14.75□□□□□ -0.05
NUP88-203ENST00000572019 CENPNQ96H22 339 aaPredicted RBP14.75□□□□□ -0.05
NUP88-203ENST00000572019 A0A1W2PN81 502 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 LINC01619G3V211 115 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 IGHV3-11P01762 117 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 CSTBP04080 98 aaKnown RBP14.74□□□□□ -0.05
NUP88-203ENST00000572019 ZNF93P35789 620 aaPredicted RBP14.74□□□□□ -0.05
NUP88-203ENST00000572019 CHRNA7P36544 502 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 OR3A3P47888 321 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 DOC2BQ14184 412 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 C5orf64Q2M2E5 130 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 MPV17LQ2QL34 196 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 MEDAGQ5VYS4 303 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 OR52L2PQ8NGH6 319 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 CPNE2Q96FN4 548 aaPredicted RBP14.74□□□□□ -0.05
NUP88-203ENST00000572019 NABP2Q9BQ15 211 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 CHCHD6Q9BRQ6 235 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 KRTAP17-1Q9BYP8 105 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 C19orf73Q9NVV2 129 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 RCC2Q9P258 522 aaKnown RBP14.74□□□□□ -0.05
NUP88-203ENST00000572019 TRAPPC2LQ9UL33 140 aa14.74□□□□□ -0.05
NUP88-203ENST00000572019 EI24O14681 340 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 NBR2O15453 112 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 LGALS1P09382 135 aaKnown RBP14.73□□□□□ -0.05
NUP88-203ENST00000572019 EGR2P11161 476 aaPredicted RBP14.73□□□□□ -0.05
NUP88-203ENST00000572019 MORN2Q502X0 79 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 OR52I1Q8NGK6 324 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 OR6Q1Q8NGQ2 317 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 TMEM106AQ96A25 262 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 ISOC1Q96CN7 298 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 KIAA1456Q9P272 454 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
NUP88-203ENST00000572019 LDLRAD4O15165 306 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 SPINT2O43291 252 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 LIMS3P0CW19 117 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 LIMS4P0CW20 117 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 FCGR1AP12314 374 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 PPP1CCP36873 323 aaKnown RBP14.72□□□□□ -0.05
NUP88-203ENST00000572019 LRRC36Q1X8D7 754 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 LINC00596Q86U02 117 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 GAPTQ8N292 157 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 TMEM138Q9NPI0 162 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 ETAA1Q9NY74 926 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 GAB2Q9UQC2 676 aa14.72□□□□□ -0.05
NUP88-203ENST00000572019 FCN1O00602 326 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 GBX2P52951 348 aaPredicted RBP14.71□□□□□ -0.05
NUP88-203ENST00000572019 C1orf146Q5VVC0 180 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 SIGIRRQ6IA17 410 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 RAB12Q6IQ22 244 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 LIN54Q6MZP7 749 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 NPBQ8NG41 125 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 GPR148Q8TDV2 347 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 ZNF184Q99676 751 aaPredicted RBP14.71□□□□□ -0.05
NUP88-203ENST00000572019 ZNF251Q9BRH9 671 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 FBXL15Q9H469 300 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 TAF9BQ9HBM6 251 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 OR2S2Q9NQN1 319 aa14.71□□□□□ -0.05
NUP88-203ENST00000572019 TRAV8-7A0A075B6U6 113 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 NDUFA3O95167 84 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 OR8U9P0C7N5 309 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 GTF2F2P13984 249 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 IGFBP3P17936 291 aaPredicted RBP14.7□□□□□ -0.06
NUP88-203ENST00000572019 BDKRB2P30411 391 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 VEGFCP49767 419 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 PLECQ15149 4684 aaKnown RBP14.7□□□□□ -0.06
NUP88-203ENST00000572019 STX19Q8N4C7 294 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 MS4A10Q96PG2 267 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 FAM103A1Q9BTL3 118 aaKnown RBP14.7□□□□□ -0.06
NUP88-203ENST00000572019 ABHD14AQ9BUJ0 271 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 BANF2Q9H503 90 aa14.7□□□□□ -0.06
NUP88-203ENST00000572019 FOXA2Q9Y261 457 aaPredicted RBP14.7□□□□□ -0.06
NUP88-203ENST00000572019 SAA2-SAA4A0A096LPE2 208 aa14.69□□□□□ -0.06
NUP88-203ENST00000572019 UBE2QL1A1L167 161 aa14.69□□□□□ -0.06
NUP88-203ENST00000572019 MCRIP1C9JLW8 97 aa14.69□□□□□ -0.06
NUP88-203ENST00000572019 LALBAP00709 142 aa14.69□□□□□ -0.06
NUP88-203ENST00000572019 SAA2P0DJI9 122 aaPredicted RBP14.69□□□□□ -0.06
NUP88-203ENST00000572019 CRIP2P52943 208 aaPredicted RBP14.69□□□□□ -0.06
NUP88-203ENST00000572019 CX3CL1P78423 397 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms